Sequence 1: | NP_001163602.1 | Gene: | Hrb87F / 48535 | FlyBaseID: | FBgn0004237 | Length: | 385 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001380080.1 | Gene: | sqd-1 / 177392 | WormBaseID: | WBGene00022235 | Length: | 308 | Species: | Caenorhabditis elegans |
Alignment Length: | 362 | Identity: | 107/362 - (29%) |
---|---|---|---|
Similarity: | 144/362 - (39%) | Gaps: | 80/362 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 AEQNDSNGN-----YDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKT 61
Fly 62 KRSRGFGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDH 126
Fly 127 DEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAI 191
Fly 192 AKQDMDRQGGGGGRGGPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGG 256
Fly 257 GQGGGSGGWNQQGGSGGGPWNNQGGGNGGWNGGGGGGYGG-GNSNGSWGGNGGGGGGGGGFGNEY 320
Fly 321 QQSYGGGPQRNSNFGNNRPAPYSQGGGGGGFNKGNQG 357 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hrb87F | NP_001163602.1 | RRM1_hnRNPA_like | 25..102 | CDD:241022 | 25/76 (33%) |
RRM_SF | 116..188 | CDD:302621 | 26/71 (37%) | ||
sqd-1 | NP_001380080.1 | RRM2_NsCP33_like | 30..104 | CDD:410187 | 24/73 (33%) |
RRM_SF | 111..185 | CDD:418427 | 28/73 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |