Protein Alignment Hrb87F and hrpa-1

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_001040945.1
• Gene: hrpa-1 / 177101
• WormBaseID: WBGene00001999
• Length: 347
• Species: Caenorhabditis elegans
• Alignment Length: 396
• Identity: 174/396 - (43%)
• Similarity: 221/396 - (55%)
• Gaps: 76/396 - (19%)

  Fly     8 NGNYDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 72
            ||:   |:...|||.|||:|:|||...||||.::..:.::|.|.|::||:||.|||||||||:|:
 Worm    10 NGS---GDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71

  Fly    73 SQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKD 137
            |....:|.|...|||.|||:||:|||||||.:.:...:..:.|:|:|.|:|:||.|:.|.|||..
 Worm    72 SGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTK 136

  Fly   138 FGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDM------ 196
            :|.:....|:.||.|.|.|||.|:.|||:|.||:.:|||:|.:.....||:|.::|.:|
 Worm   137 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQMN 201

  Fly   197 -DRQ-GGGGGRGGPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQG 259
             ||: .||..|.|.|.|..||    |.|||||||..::.|.|.:||.||||..|..|||:|
 Worm   202 RDRETRGGRSRDGQRGGYNGG----GGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYG---- 258

  Fly   260 GGSGGWNQQGGSGGGPWNNQGGGNGGWNG-----GGGGGYGGGNSNGSWGGNGGGGGGGGGFGNE 319
               |||.|||          |||.|||.|     ||||          ||..||||.||.|...:
 Worm   259 ---GGWGQQG----------GGGQGGWGGPQQQQGGGG----------WGQQGGGGQGGWGGPQQ 300

  Fly   320 YQQSYGGGPQRNSNFGNNRPAPYSQGGGGGGFNKGNQGGGQGFAGNNYNTGGGGQGG-----NMG 379
            .||...||||              |||||||:  |.||..||        |.|||.|     :..
 Worm   301 QQQGGWGGPQ--------------QGGGGGGW--GGQGQQQG--------GWGGQSGAQQWAHAQ 341

  Fly   380 GGNRRY 385
            ||||.|
 Worm   342 GGNRNY 347

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	42/76 (55%)
		RRM_SF	116..188	CDD:302621	32/71 (45%)
hrpa-1	NP_001040945.1	RRM1_hnRNPA_like	24..101	CDD:241022	42/76 (55%)
		RRM2_hnRNPA_like	115..187	CDD:240774	32/71 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	72	1.000	Domainoid score	I6069
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	302	1.000	Inparanoid score	I1613
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG46466
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	1	1.000	-	-		FOG0000779
OrthoInspector	1	1.000	-	-		otm14468
orthoMCL	1	0.900	-	-		OOG6_103644
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2767
SonicParanoid	1	1.000	-	-		X431
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	12	11.910