Protein Alignment Hrb87F and Msi1

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_032655.1
• Gene: Msi1 / 17690
• MGIID: 107376
• Length: 362
• Species: Mus musculus
• Alignment Length: 360
• Identity: 103/360 - (28%)
• Similarity: 151/360 - (41%)
• Gaps: 59/360 - (16%)

  Fly    20 PEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNA 84
            |....|:|||||.::||.:||:.:|.::|.:.:.:||:||.|||||||||:|:.....:|.....
Mouse    16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

  Fly    85 RPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSD 149
            ..|::|.:|::||.|.||:.  .|......||:|||||..:...|.::.||:.||::....::.|
Mouse    81 SRHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFD 143

  Fly   150 KDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGGGGGRGGPRAGGRG 214
            |.|.:.|||.|:.|:..|.|:|:.....|.|.||.::.|||..|:.|...|...||......|.
Mouse   144 KTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGM- 207

  Fly   215 GQGDR---GQGGGGWGG-QNRQNGGGNWGGAGGG------------------------------- 244
               |.   |.|..|:.| |.......::.|...|
Mouse   208 ---DAFMLGIGMLGYPGFQATTYASRSYTGLAPGYTYQFPEFRVERSPLPSAPVLPELTAIPLTA 269

  Fly   245 -GGFGNSGGNFGGGQGGGSGGWNQQGGSGGGPWNNQGGGNGGWNGGGGGG-----YGGGNSNGSW 303
             |....:.......:|.||..|......|..|     ...||:.|....|     ||..|.:...
Mouse   270 YGPMAAAAAAAAVVRGTGSHPWTMAPPPGSTP-----SRTGGFLGTTSPGPMAELYGAANQDSGV 329

  Fly   304 GG--NGGGGGGGGGFGNEYQQSYGGGPQRNSNFGN 336
            ..  :........|||:..     |||...:.|.|
Mouse   330 SSYISAASPAPSTGFGHSL-----GGPLIATAFTN 359

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	33/76 (43%)
		RRM_SF	116..188	CDD:302621	26/71 (37%)
Msi1	NP_032655.1	RRM1_MSI	22..96	CDD:241020	31/73 (42%)
		PABP-1234	<32..312	CDD:130689	83/290 (29%)
		RRM2_MSI	110..183	CDD:240769	26/72 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910