Protein Alignment Hrb87F and msi-1

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_001369851.1
• Gene: msi-1 / 175514
• WormBaseID: WBGene00003423
• Length: 320
• Species: Caenorhabditis elegans
• Alignment Length: 196
• Identity: 70/196 - (35%)
• Similarity: 114/196 - (58%)
• Gaps: 13/196 - (6%)

  Fly     2 AEQND-SNGNYDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSR 65
            |:.:| |:|:.|.|          |:|||||.::||.:.|:.:|.::|.:.:.:||:||.|||:|
 Worm    32 ADSDDGSHGSQDPG----------KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86

  Fly    66 GFGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEEC 130
            ||||||:.....:|...|.|.|::||:.::||.|.|::  .........||:|:|||......|.
 Worm    87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKR--TQAKLVTKTKKVFIGGLSATSTLED 149

  Fly   131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQD 195
            :::||:.:|::....::.||.|.:.|||.|:.||..:..||:.....|.|..|.::.|||..|:.
 Worm   150 MKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKEV 214

  Fly   196 M 196
            |
 Worm   215 M 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	34/76 (45%)
		RRM_SF	116..188	CDD:302621	23/71 (32%)
msi-1	NP_001369851.1	RRM1_MSI	46..121	CDD:409990	33/74 (45%)
		RRM2_MSI	135..208	CDD:240769	23/72 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910