DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Hrb87F and pabp-2

DIOPT Version :9

Sequence 1:	NP_001163602.1	Gene:	Hrb87F / 48535	FlyBaseID:	FBgn0004237	Length:	385	Species:	Drosophila melanogaster
Sequence 2:	NP_492504.1	Gene:	pabp-2 / 172768	WormBaseID:	WBGene00003904	Length:	205	Species:	Caenorhabditis elegans

Alignment Length:	154	Identity:	32/154 - (20%)
Similarity:	62/154 - (40%)	Gaps:	38/154 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 AEQNDSNGNY--------DDGEEITEPEQ-----LRKLFIGGLDYRTTDDGLKAHFEKWGNIVDV 53
            |.||:..|:.        :..:.:..||:     .:.:::|.:||..|.:.::.||...|::..|
Worm    43 AIQNEMVGHMNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRV 107

  Fly    54 VVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKIDGR--TVEPKRAVPRQEIDSPNAGAT--- 113
            .:..|..:...:||.::.:::...:.||.......:.||  .|:|||.      :.|....|
Worm   108 TIQCDRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQIKVDPKRT------NKPGMSTTNRP 166

  Fly   114 --------------VKKLFVGGLR 123
                          ||.::.||.|
Worm   167 PFRGRGGRGRGNVIVKYVYAGGFR 190

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	19/78 (24%)
Hrb87F	NP_001163602.1	RRM_SF	116..188	CDD:302621	3/8 (38%)
pabp-2	NP_492504.1	RRM_SF	79..154	CDD:388407	17/74 (23%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910