Protein Alignment Hrb87F and Elavl3

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_034617.1
• Gene: Elavl3 / 15571
• MGIID: 109157
• Length: 367
• Species: Mus musculus
• Alignment Length: 161
• Identity: 45/161 - (27%)
• Similarity: 75/161 - (46%)
• Gaps: 19/161 - (11%)

  Fly     7 SNGNYDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFIT 71
            :||..||.:        ..|.:..|....|.|..|:.|...|:|....:::|..|.:|.|:||:.
Mouse    30 TNGATDDSK--------TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVN 86

  Fly    72 YSQSYMIDNAQNA-RPHKIDGRTVEPKRAVPRQEIDSPNAGATVK--KLFVGGLRDDHDEECLRE 133
            ||.....|.|.|. ...|:..:|::...|.|        :.|:::  .|:|.||.....::.:.:
Mouse    87 YSDPNDADKAINTLNGLKLQTKTIKVSYARP--------SSASIRDANLYVSGLPKTMSQKEMEQ 143

  Fly   134 YFKDFGQIVSVNIVSDKDTGKKRGFAFIEFD 164
            .|..:|:|::..|:.|:.||..||..||.||
Mouse   144 LFSQYGRIITSRILLDQATGVSRGVGFIRFD 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	22/77 (29%)
		RRM_SF	116..188	CDD:302621	17/49 (35%)
Elavl3	NP_034617.1	ELAV_HUD_SF	36..366	CDD:273741	42/155 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910