Sequence 1: | NP_001163602.1 | Gene: | Hrb87F / 48535 | FlyBaseID: | FBgn0004237 | Length: | 385 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001011724.1 | Gene: | HNRNPA1L2 / 144983 | HGNCID: | 27067 | Length: | 320 | Species: | Homo sapiens |
Alignment Length: | 355 | Identity: | 165/355 - (46%) |
---|---|---|---|
Similarity: | 214/355 - (60%) | Gaps: | 47/355 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 EPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQN 83
Fly 84 ARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVS 148
Fly 149 DKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGGGGGRGGPRAGGR 213
Fly 214 GGQGDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFG-GGQGGGSGGWNQQGGSGGGPWN 277
Fly 278 NQGGGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGGGFGNEYQQSYGGGPQRNSNFGNNRPAPY 342
Fly 343 SQGGGGGGFNKGNQGGGQGFAGNNYNTGGG 372 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hrb87F | NP_001163602.1 | RRM1_hnRNPA_like | 25..102 | CDD:241022 | 49/76 (64%) |
RRM_SF | 116..188 | CDD:302621 | 35/71 (49%) | ||
HNRNPA1L2 | NP_001011724.1 | Globular A domain | 4..94 | 56/84 (67%) | |
RRM1_hnRNPA1 | 12..92 | CDD:410154 | 52/79 (66%) | ||
Globular B domain | 95..185 | 44/89 (49%) | |||
RRM_SF | 105..184 | CDD:418427 | 39/78 (50%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 181..216 | 15/62 (24%) | |||
RNA-binding RGG-box | 218..240 | 13/34 (38%) | |||
HnRNPA1 | 255..292 | CDD:402981 | 17/38 (45%) | ||
Nuclear targeting sequence. /evidence=ECO:0000250 | 268..305 | 16/38 (42%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 271..320 | 18/49 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 102 | 1.000 | Domainoid score | I6828 |
eggNOG | 1 | 0.900 | - | - | E33208_3BA81 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 360 | 1.000 | Inparanoid score | I2209 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG46466 | |
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000779 | |
OrthoInspector | 1 | 1.000 | - | - | otm40611 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103644 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X431 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.780 |