DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb87F and AgaP_AGAP001419

DIOPT Version :9

Sequence 1:NP_001163602.1 Gene:Hrb87F / 48535 FlyBaseID:FBgn0004237 Length:385 Species:Drosophila melanogaster
Sequence 2:XP_003435823.1 Gene:AgaP_AGAP001419 / 1281757 VectorBaseID:AGAP001419 Length:532 Species:Anopheles gambiae


Alignment Length:367 Identity:80/367 - (21%)
Similarity:115/367 - (31%) Gaps:165/367 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKI 89
            ::|.|.:.....:|.|...|||.|.|.|:.:|.||.|..:||:.|:|::..   |.|.|| ..::
Mosquito   169 EVFCGKIPKDMYEDELIPLFEKCGKIWDLRLMMDPMTGTNRGYAFVTFTSR---DAASNA-VREL 229

  Fly    90 DGRTVEPKR------AVP--------------RQEI-----------------DSP-----NAG- 111
            :...::|..      :||              ::||                 .||     |.| 
Mosquito   230 NNYEIKPGNCLKINVSVPNLRLFVGNIPKSKGKEEILDEFGKLTAGLVEVIIYSSPDDKKKNRGF 294

  Fly   112 ----------------------------------------------ATVKKLFVGGLRDDHDEEC 130
                                                          :.||.|:|..|..|..||.
Mosquito   295 CFLEYESHKAASLAKRRLGTGRIKVWNCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDTSEEK 359

  Fly   131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDK----------------IILQKTHS 179
            |:|.|:.||::..|..:.|        :||:.|:|.|...|                :.|.|..|
Mosquito   360 LKESFEQFGRVERVKKIKD--------YAFVHFEDRDNAVKAMKDLDGKEVGGSNIEVSLAKPPS 416

  Fly   180 IKNKTLDVKKAIAKQ-------------------DMDRQGGGGGRG---------GPRA------ 210
            .|.|..::.:|..::                   .|..|..|...|         ||.|      
Mosquito   417 DKKKKEEILRARERRMTQFLQTRIGLVNTVPSFPSMSPQHAGMMPGAMPPMRVPSGPGAIGKRKF 481

  Fly   211 -GGRGGQGD--RGQG-----GGGWGGQN------RQNGGGNW 238
             ||...|||  |..|     |..||.|.      ..|||..|
Mosquito   482 EGGPHNQGDIKRRYGALANFGNSWGSQPLPQQPLGANGGEQW 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb87FNP_001163602.1 RRM1_hnRNPA_like 25..102 CDD:241022 25/96 (26%)
RRM_SF 116..188 CDD:302621 24/87 (28%)
AgaP_AGAP001419XP_003435823.1 RRM1_hnRNPR_like 167..245 CDD:240695 23/79 (29%)
RRM2_hnRNPR_like 248..329 CDD:240696 6/80 (8%)
RRM3_hnRNPR_like 343..414 CDD:240697 22/78 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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