DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb87F and Rbp6

DIOPT Version :10

Sequence 1:NP_476806.2 Gene:Hrb87F / 48535 FlyBaseID:FBgn0004237 Length:385 Species:Drosophila melanogaster
Sequence 2:XP_061499213.1 Gene:Rbp6 / 1277242 VectorBaseID:AGAMI1_006135 Length:383 Species:Anopheles gambiae


Alignment Length:259 Identity:87/259 - (33%)
Similarity:120/259 - (46%) Gaps:44/259 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEQNDSNGNYDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRS- 64
            |..||...|.:....:...|....|:|||||.::|:.:.|:.:|.|:|.|.:|:|||||.|:|| 
Mosquito     1 MEHQNQDLGVHPGNNQAEVPNDPGKMFIGGLSWQTSPESLRDYFSKFGEITEVMVMKDPTTRRSS 65

  Fly    65 -----------------RGFGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGA 112
                             |||||||:.....:|.......|::||:.::||.|.||:.  .|....
Mosquito    66 SSAMGLADSSAPLYSRPRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVAFPRRA--HPKMVT 128

  Fly   113 TVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKT 177
            ..||:|||||......|.::.||:.||.|....::.||.|.:.|||.|:.|...|.|||:.....
Mosquito   129 RTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHF 193

  Fly   178 HSIKNKTLDVKKAIAKQDM-------DRQGGGG-----------GRGGPR------AGGRGGQG 217
            |.|.||.::.|||..|:.|       .|..|.|           ..|.|.      |.|||..|
Mosquito   194 HEINNKMVECKKAQPKEVMLPANLAKTRTAGRGTYDFMWSLGTLPDGFPAAAYAAYAAGRGFSG 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb87FNP_476806.2 RRM1_hnRNPA_like 25..102 CDD:409992 35/94 (37%)
RRM_SF 116..188 CDD:473069 28/71 (39%)
Rbp6XP_061499213.1 None

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