DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Hrb87F and AgaP_AGAP012503

DIOPT Version :9

Sequence 1:	NP_001163602.1	Gene:	Hrb87F / 48535	FlyBaseID:	FBgn0004237	Length:	385	Species:	Drosophila melanogaster
Sequence 2:	XP_307184.4	Gene:	AgaP_AGAP012503 / 1268621	VectorBaseID:	AGAP012503	Length:	417	Species:	Anopheles gambiae

Alignment Length:	217	Identity:	49/217 - (22%)
Similarity:	100/217 - (46%)	Gaps:	37/217 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 QNDSNGNYDDGEEITEPEQLRKLFI--GGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRG 66
            ::::..:.:..:||:|...:.:||:  |   .:.|.:.|..|||..|.|.:.||:.|.||.:.:|
Mosquito     5 RDNTMSDVNRAKEISEEPPMSRLFVICG---KQITKEQLIKHFEPDGTIEECVVITDRKTGQGKG 66

  Fly    67 FGFITYSQSYMIDNAQNARPHKIDGRTVE----PKRAVPRQEID---SPNAGATVK-----KLFV 119
            ..::.::::     :..||..:.:|..||    |.:.:.....:   :.:..|.|.     :||
Mosquito    67 VAYVKFTKT-----SSAARGLRKNGTVVEGDTRPIKVMISASYNRDKNSDTSADVNENQFLRLF- 125

  Fly   120 GGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKN-- 182
            ..:..:..||.|:|.|...|.:..|.:|.||...|:.. |:|:|..:       |:...:|:|
Mosquito   126 AIVPSNRTEEQLKEEFGTHGTVTQVRLVPDKKNDKQCA-AYIKFPTF-------LETALAIENCN 182

  Fly   183 ----KTLDVKKAIAKQDMDRQG 200
                ....|.::..:|:.:::|
Mosquito   183 PQYKAKFCVPRSKLQQEREQKG 204

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	22/82 (27%)
Hrb87F	NP_001163602.1	RRM_SF	116..188	CDD:302621	19/77 (25%)
AgaP_AGAP012503	XP_307184.4	RRM_SF	22..100	CDD:302621	22/85 (26%)
		RRM_SF	122..193	CDD:302621	20/79 (25%)
		RRM_SF	229..300	CDD:302621
		RRM_SF	336..401	CDD:302621
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910