Protein Alignment Hrb87F and Pabpn1

DIOPT Version :9

• Sequence 1: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_001128480.1
• Gene: Pabpn1 / 116697
• RGDID: 619928
• Length: 302
• Species: Rattus norvegicus
• Alignment Length: 131
• Identity: 38/131 - (29%)
• Similarity: 57/131 - (43%)
• Gaps: 19/131 - (14%)

  Fly    95 EPKRAVPRQEIDSP---NAG-----------ATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVN 145
            |.:..|.:|...||   |||           |..:.::||.:......|.|..:|...|.:..|.
  Rat   134 ELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVT 198

  Fly   146 IVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQG-GGGGRGGPR 209
            |:.||.:|..:|||:|||.|.:.|...:.......:.:.:   |.|.|: .:|.| ....||.||
  Rat   199 ILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQI---KVIPKR-TNRPGISTTDRGFPR 259

  Fly   210 A 210
            |
  Rat   260 A 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	2/6 (33%)
		RRM_SF	116..188	CDD:302621	19/71 (27%)
Pabpn1	NP_001128480.1	RRM	109..>285	CDD:223796	38/131 (29%)
		RRM_II_PABPN1	169..244	CDD:240994	21/77 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910