Protein Alignment Hrb87F and Rbm3

DIOPT Version :10

• Sequence 1: NP_476806.2
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_446148.1
• Gene: Rbm3 / 114488
• RGDID: 620145
• Length: 156
• Species: Rattus norvegicus
• Alignment Length: 260
• Identity: 65/260 - (25%)
• Similarity: 88/260 - (33%)
• Gaps: 118/260 - (45%)

  Fly    25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNA-RPHK 88
            |||:|||::.|.:..|:.||..:|.|.:|||:||.:|:|||||||||::......:|..| ....
  Rat     7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGES 71

  Fly    89 IDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTG 153
            :|||.:                            |.||                     :.|...
  Rat    72 LDGRQI----------------------------RVDH---------------------AGKSAR 87

  Fly   154 KKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGGGGGRGGPRAGGRGGQGD 218
            ..||.||                                        |..|||  |:..||| ||
  Rat    88 GTRGGAF----------------------------------------GAHGRG--RSYSRGG-GD 109

  Fly   219 RGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGGWNQQGGSGGGPWNNQGGGN 283
            :|.|.|.:..:          ..|.|.|:|.|....|..|||               ::...|||
  Rat   110 QGYGSGRYDSR----------PGGYGYGYGRSRDYSGRSQGG---------------YDRYSGGN 149

  Fly   284  283
              Rat   150  149

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_476806.2	RRM1_hnRNPA_like	25..102	CDD:409992	32/77 (42%)
		RRM_SF	116..188	CDD:473069	8/71 (11%)
Rbm3	NP_446148.1	RRM_CIRBP_RBM3	6..85	CDD:409883	35/126 (28%)