DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb87F and HNRNPA0

DIOPT Version :10

Sequence 1:NP_476806.2 Gene:Hrb87F / 48535 FlyBaseID:FBgn0004237 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_006796.1 Gene:HNRNPA0 / 10949 HGNCID:5030 Length:305 Species:Homo sapiens


Alignment Length:346 Identity:161/346 - (46%)
Similarity:202/346 - (58%) Gaps:44/346 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQN 83
            |..||.|||||||:.:|::.||:.|||.:|.:.|.||:.:|:|||||.|||:|||.....|.|..
Human     2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMA 66

  Fly    84 ARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVS 148
            |.||.:||.|||.||||.|::...|.|.|.|||||||||:.|..|..|.|:|..||.:....|::
Human    67 ASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIA 131

  Fly   149 DKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGGGGGRGGPRAGGR 213
            ||.:||||||.|:.|.::|..||..:.|.|.|:...::||||:.|:|:...|||||    ....|
Human   132 DKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKEDIYSGGGGGG----SRSSR 192

  Fly   214 GGQGDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGGWNQQGGSGGGPWNN 278
            ||:|.||:|||     ..|||...    |||||: ||.|.:|   |||.||:|..||.|||  ::
Human   193 GGRGGRGRGGG-----RDQNGLSK----GGGGGY-NSYGGYG---GGGGGGYNAYGGGGGG--SS 242

  Fly   279 QGGGNGGWNGGGGGGYGGGNSNGSWGG-NGGGGGGGGGFGNEYQQSYGGGPQRNSNFGNNRPAPY 342
            .||.:.|...||.|.|....|  |:|. ..||||||||      .|:||    .||.|     ||
Human   243 YGGSDYGNGFGGFGSYSQHQS--SYGPMKSGGGGGGGG------SSWGG----RSNSG-----PY 290

  Fly   343 SQG-GGGGGFNKGNQGGGQGF 362
            ..| |||||:      ||..|
Human   291 RGGYGGGGGY------GGSSF 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb87FNP_476806.2 RRM1_hnRNPA_like 25..102 CDD:409992 43/76 (57%)
RRM_SF 116..188 CDD:473069 31/71 (44%)
HNRNPA0NP_006796.1 RRM1_hnRNPA0 5..83 CDD:409764 43/77 (56%)
RRM2_hnRNPA0 99..178 CDD:409993 36/78 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..214 20/52 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..305 27/65 (42%)

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