Protein Alignment Hrb87F and Rbmy1j

DIOPT Version :10

• Sequence 1: NP_476806.2
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_001395842.1
• Gene: Rbmy1j / 103694544
• RGDID: 9125062
• Length: 388
• Species: Rattus norvegicus
• Alignment Length: 444
• Identity: 90/444 - (20%)
• Similarity: 147/444 - (33%)
• Gaps: 147/444 - (33%)

  Fly    17 ITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA 81
            :.|.||..|:|||||:..|....|:..|.::|.|..|::|:|.:||:||||.|:|:.   ...:|
  Rat     1 MAESEQPGKIFIGGLNLETRQKTLQVIFGRFGPITHVILMRDRETKKSRGFAFVTFQ---CPGDA 62

  Fly    82 QNARPH----KIDGRTVEPKRAVPRQEID----------SPNAGAT-VKKLFVGGLRDDHDEECL 131
            :||...    .:||:.::.::|.....::          |...||: :.|...||
  Rat    63 KNAVKEMNGVSLDGKRIKVEQARRPSSLERSSKRRPLSFSRTRGASRILKCGRGG---------- 117

  Fly   132 REYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDD--YDPVDKIILQKTHSIKNKTLDVKKAIAKQ 194
                              ...|:.|.......||  |.|...|      |...:...||::.:.:
  Rat   118 ------------------SSRGRSRPSRERNLDDGRYTPNFNI------SSSGRHFAVKRSTSSK 158

  Fly   195 DMDRQGGGGGRGGPRAGGRGGQGDRGQGGGGW-------------------------GGQNRQNG 234
               |:|....|....|..|...|.||:...|.                         |..:..:.
  Rat   159 ---REGPPSKRSATSALTRANPGLRGREPHGREVSRNMPRREPVSSRRDEYPLPRDDGYSSNDSY 220

  Fly   235 GGNWGGAGGG-GGFGNSG----------GNFGGGQGGGSGGWNQ--QGGSGGGPWNNQGGGNGGW 286
            ...:.....| ..:||..          .:..|..||....:::  .|.|....:.:.|..:.
  Rat   221 SRRYASTSRGYRDYGNYSSRDEHASKVFSDHAGYHGGRDRDFSEYLSGSSYRDTYESYGSFHE-- 283

  Fly   287 NGGGGGGYGGGNSNGSWGGNGGGGGGGGGFGNEYQQSYGGGPQRNSNFGNNRPA---------PY 342
            .....|.|.|.|....:..:.||.|||       :::|.|  .|:..:|..|..         .|
  Rat   284 EPSARGTYTGNNRYDDYSSSRGGYGGG-------RETYSG--SRSDIYGYERSGRQVLPPIDREY 339

  Fly   343 SQGGGG-------------------------GGFNKGNQGGGQGFAGNNYNTGG 371
            |:.||.                         ||::.|::       ...|.:||
  Rat   340 SERGGREERGHSPMDRLYRASHESYTISSRFGGYHGGHE-------ETRYESGG 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_476806.2	RRM1_hnRNPA_like	25..102	CDD:409992	28/80 (35%)
		RRM_SF	116..188	CDD:473069	11/73 (15%)
Rbmy1j	NP_001395842.1	RRM_SF	7..86	CDD:473069	28/81 (35%)
		hnRNP-R-Q	<10..>230	CDD:273732	53/259 (20%)