Protein Alignment Hrb87F and msi2

DIOPT Version :10

• Sequence 1: NP_476806.2
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: XP_004911774.1
• Gene: msi2 / 100038158
• XenbaseID: XB-GENE-488852
• Length: 407
• Species: Xenopus tropicalis
• Alignment Length: 400
• Identity: 116/400 - (28%)
• Similarity: 163/400 - (40%)
• Gaps: 80/400 - (20%)

  Fly     5 NDSNGNYDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGF 69
            |||  .:|.|          |:|||||.::|:.|.|:.:|.|:|.|.:.:||:||.|||||||||
 Frog    14 NDS--QHDPG----------KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGF 66

  Fly    70 ITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREY 134
            :|::....:|.......|::|.:|::||.|.||:.  .|......||:|||||..:...|.:::|
 Frog    67 VTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRA--QPKMVTRTKKIFVGGLSANTVVEDVKQY 129

  Fly   135 FKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQ 199
            |:.||::....::.||.|.:.|||.|:.|:..|.|:|:.....|.|.||.::.|||..|:.|...
 Frog   130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194

  Fly   200 G-GGGGRGGPRAG-----GRGGQG------DRGQGGGGWGGQNRQNGGG-----NWG-------- 239
            | .|..||.|...     |.|..|      ..|:|..|:.........|     .:|
 Frog   195 GTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYSYQFPGFPAAAAYGPVAAAAVA 259

  Fly   240 GAGGGG----GF----GNSGGNFGGGQGGGSGGWNQQ-------GGSGGGPWN------------ 277
            .|.|.|    ||    |:..........|..|....|       ..:...|.:
 Frog   260 AARGSGIPDYGFYTTPGDQRATLSFADYGSMGPRTAQMLRSEHAASASNSPLHHLPSPDQFKSPA 324

  Fly   278 ---------NQG--GGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGGGFGNEYQQSYGGGPQRN 331
                     |.|  ....|.|....||:.|.||.|......|......|.||...   ...||..
 Frog   325 VLNSYSAQPNYGAPASPAGANPARPGGFPGANSPGPVADLYGTASQDSGVGNYIS---AASPQPG 386

  Fly   332 SNFGNNRPAP 341
            |.|.:....|
 Frog   387 SGFSHGIAGP 396

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb87F	NP_476806.2	RRM1_hnRNPA_like	25..102	CDD:409992	34/76 (45%)
		RRM_SF	116..188	CDD:473069	26/71 (37%)
msi2	XP_004911774.1	RRM1_MSI2	17..109	CDD:410153	39/103 (38%)
		RRM2_MSI	111..184	CDD:240769	26/72 (36%)