Sequence 1: | NP_001163602.1 | Gene: | Hrb87F / 48535 | FlyBaseID: | FBgn0004237 | Length: | 385 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004911774.1 | Gene: | msi2 / 100038158 | XenbaseID: | XB-GENE-488852 | Length: | 407 | Species: | Xenopus tropicalis |
Alignment Length: | 400 | Identity: | 116/400 - (28%) |
---|---|---|---|
Similarity: | 163/400 - (40%) | Gaps: | 80/400 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 NDSNGNYDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGF 69
Fly 70 ITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREY 134
Fly 135 FKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQ 199
Fly 200 G-GGGGRGGPRAG-----GRGGQG------DRGQGGGGWGGQNRQNGGG-----NWG-------- 239
Fly 240 GAGGGG----GF----GNSGGNFGGGQGGGSGGWNQQ-------GGSGGGPWN------------ 277
Fly 278 ---------NQG--GGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGGGFGNEYQQSYGGGPQRN 331
Fly 332 SNFGNNRPAP 341 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hrb87F | NP_001163602.1 | RRM1_hnRNPA_like | 25..102 | CDD:241022 | 34/76 (45%) |
RRM_SF | 116..188 | CDD:302621 | 26/71 (37%) | ||
msi2 | XP_004911774.1 | RRM | <2..162 | CDD:223796 | 62/161 (39%) |
RRM1_MSI | 23..97 | CDD:241020 | 32/73 (44%) | ||
RRM2_MSI | 111..184 | CDD:240769 | 26/72 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |