DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpY-55A and Ppef1

DIOPT Version :10

Sequence 1:NP_476689.1 Gene:PpY-55A / 48532 FlyBaseID:FBgn0003140 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001421152.1 Gene:Ppef1 / 317498 RGDID:1562772 Length:664 Species:Rattus norvegicus


Alignment Length:319 Identity:91/319 - (28%)
Similarity:149/319 - (46%) Gaps:44/319 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LTTHEIDCIIKELTSLNGSECTLKEELIERLIQQTREVIKWQPMLLELQA----PVNICGDIHGQ 64
            ||..:|:.:::...    .:.||....:..::.:.|:::|..|....:|.    .:.||||:||:
  Rat   141 LTFTDINLLLQAFK----QQQTLHAHYVLEVLFEARKILKQMPNFTRIQTFPAKEITICGDLHGK 201

  Fly    65 FTDLLRIFKACGFPPKAN-YLFLGDYVDRGKQSLETICLLFAYKVKYPLNFFLLRGNHESASINK 128
            ..||:.||...|.|.:.| |:|.||:||||..|:|.:.:|....:.||.:..|.|||||...:|.
  Rat   202 LDDLMLIFYKNGLPSEKNPYVFNGDFVDRGNNSMEILMILLVSFLVYPTDLHLNRGNHEDFMMNL 266

  Fly   129 IYGFYDEIKRR---HTVRLWHSFTDCFNWLPVAALVGERIFCCHGGLSPS--LRNLQQIN----- 183
            .|||..||.::   |..::.....:.:.|||:..::...|...|||:|.|  |..|||:.     
  Rat   267 RYGFTKEILQKYKLHGKKILQVLEELYTWLPIGTIIDNEILVIHGGISESTDLNILQQLQRNKMK 331

  Fly   184 -------------HIQRPTDIPDEGI------------MCDLLWADLNHTTKGWGHNDRGVSFTF 223
                         :|::....|.|..            :.||||:|.......:.:..||....|
  Rat   332 SVLMPPMSTNQECNIKKNKAGPSEQSASEQLTKLEWEQIIDLLWSDPRGKKGCYPNTSRGGGCYF 396

  Fly   224 DKVIVRDFLKAFDLQLMVRAHEVVEDGYEFFANRQLVTVFSAPNYCGMMNNAGGVMSVS 282
            ...:....|....|::::|:||...||||...:.:::|||||.||....:|.|..:.:|
  Rat   397 GPDVTSKVLNKNQLKMVIRSHECKPDGYEICHDGKVITVFSASNYYEEGSNRGAYIRLS 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpY-55ANP_476689.1 MPP_PP1_PPKL 8..294 CDD:277359 89/315 (28%)
Ppef1NP_001421152.1 IQ 40..>57 CDD:197470
MPP_RdgC 140..466 CDD:277364 91/319 (29%)
FRQ1 498..660 CDD:444056
Blue background indicates that the domain is not in the aligned region.

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