DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1-13C and SIT4

DIOPT Version :9

Sequence 1:NP_524921.1 Gene:Pp1-13C / 48531 FlyBaseID:FBgn0003132 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_010236.1 Gene:SIT4 / 851513 SGDID:S000002205 Length:311 Species:Saccharomyces cerevisiae


Alignment Length:273 Identity:121/273 - (44%)
Similarity:179/273 - (65%) Gaps:4/273 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LSEGEIRGLCLKSREILLAQPILLELEAPLKICGDIHGQYYDLLRLFE-YGGYPPEANYLFLGDY 91
            |:|.|::.||...:|:|:.:..:..::.|:.:|||||||::|||.||. .||:|.:.||:|||||
Yeast    19 LTENEMKQLCEMVKELLMEESNIQPVQTPVTVCGDIHGQFHDLLELFRTAGGFPDDINYIFLGDY 83

  Fly    92 VDRGKQSLETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRY-TIKLWKTFTDCFN 155
            ||||..||||..||:..|:||.....|:|||||...|.::||||:||..:| :..:||.....|:
Yeast    84 VDRGYYSLETFTLLMCLKVKYPAKITLVRGNHESRQITQVYGFYEECLNKYGSTTVWKYCCQVFD 148

  Fly   156 CLPVVAIVDEKIFCCHGGLSPDLTSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTIGWGENDRG 220
            .|.:.||:|.||.|.||||||::..::|||.:.|..:||.:|...|||||||| :...|..:.||
Yeast   149 FLTLAAIIDGKILCVHGGLSPEIRMLDQIRVLSRAQEVPHEGGFSDLLWSDPD-NVEAWQVSPRG 212

  Fly   221 VSFTFGAEVVVKFLQKHDLDLICRAHQVVEDGYEF-FAKRQLVTLFSAPNYCGEFDNAGAMMSVD 284
            ..:.||::|..:|...:.|:||.||||:|.:|::: |.::.:||::||||||....|..::|.||
Yeast   213 AGWLFGSKVAREFNHVNGLNLIARAHQLVMEGFKYHFPEKDVVTVWSAPNYCYRCGNVASVMKVD 277

  Fly   285 NTLMCSFQILKPV 297
            ..|..:|:|...|
Yeast   278 EDLEPTFKIFSAV 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-13CNP_524921.1 PTZ00480 5..299 CDD:185658 121/273 (44%)
MPP_PP1_PPKL 6..296 CDD:277359 120/270 (44%)
SIT4NP_010236.1 MPP_PP2A_PP4_PP6 7..291 CDD:277360 121/273 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.