DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1-13C and TOPP6

DIOPT Version :10

Sequence 1:NP_524921.1 Gene:Pp1-13C / 48531 FlyBaseID:FBgn0003132 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_851123.1 Gene:TOPP6 / 834356 AraportID:AT5G43380 Length:331 Species:Arabidopsis thaliana


Alignment Length:296 Identity:227/296 - (76%)
Similarity:259/296 - (87%) Gaps:1/296 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LESIISRLLEVRGARPGKNVQLSEGEIRGLCLKSREILLAQPILLELEAPLKICGDIHGQYYDLL 71
            |.|:|:||||.| .:|||.|||||.||:.||..||:|.|.||.|||||||:||||||||||.|||
plant     6 LNSVINRLLEAR-EKPGKIVQLSETEIKQLCFVSRDIFLRQPNLLELEAPVKICGDIHGQYPDLL 69

  Fly    72 RLFEYGGYPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYD 136
            ||||:|||||.:||||||||||||||||||||||||||||:.|||||||||||.|||||||||||
plant    70 RLFEHGGYPPNSNYLFLGDYVDRGKQSLETICLLLAYKIKFPENFFLLRGNHESASINRIYGFYD 134

  Fly   137 ECKRRYTIKLWKTFTDCFNCLPVVAIVDEKIFCCHGGLSPDLTSMEQIRRIMRPTDVPDQGLLCD 201
            |||||:::|:|:.||||||||||.|::||:|||.||||||:|.|:.|||.|.||||:||:|||||
plant   135 ECKRRFSVKIWRIFTDCFNCLPVAALIDERIFCMHGGLSPELLSLRQIRDIRRPTDIPDRGLLCD 199

  Fly   202 LLWSDPDKDTIGWGENDRGVSFTFGAEVVVKFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTLFS 266
            |||||||||..|||.||||||:|||:::|..||::.|||||||||||||||:||||.:||||:||
plant   200 LLWSDPDKDVRGWGPNDRGVSYTFGSDIVSGFLKRLDLDLICRAHQVVEDGFEFFANKQLVTIFS 264

  Fly   267 APNYCGEFDNAGAMMSVDNTLMCSFQILKPVEKRKK 302
            |||||||||||||||||...|.|||||||..:|:.|
plant   265 APNYCGEFDNAGAMMSVSEDLTCSFQILKSNDKKSK 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-13CNP_524921.1 MPP_PP1_PPKL 6..296 CDD:277359 224/288 (78%)
TOPP6NP_851123.1 MPP_PP1_PPKL 6..293 CDD:277359 223/287 (78%)

Return to query results.
Submit another query.