DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1-13C and TOPP4

DIOPT Version :10

Sequence 1:NP_524921.1 Gene:Pp1-13C / 48531 FlyBaseID:FBgn0003132 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_181514.1 Gene:TOPP4 / 818571 AraportID:AT2G39840 Length:321 Species:Arabidopsis thaliana


Alignment Length:296 Identity:232/296 - (78%)
Similarity:256/296 - (86%) Gaps:0/296 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LESIISRLLEVRGARPGKNVQLSEGEIRGLCLKSREILLAQPILLELEAPLKICGDIHGQYYDLL 71
            |:.||.||.|||.|||||.|||||.||:.||..:|:|.|.||.|||||||:||||||||||.|||
plant    19 LDDIIRRLTEVRLARPGKQVQLSEAEIKQLCTTARDIFLQQPNLLELEAPIKICGDIHGQYSDLL 83

  Fly    72 RLFEYGGYPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYD 136
            |||||||:||.||||||||||||||||||||||||||||||..||||||||||||||||||||||
plant    84 RLFEYGGFPPSANYLFLGDYVDRGKQSLETICLLLAYKIKYPGNFFLLRGNHECASINRIYGFYD 148

  Fly   137 ECKRRYTIKLWKTFTDCFNCLPVVAIVDEKIFCCHGGLSPDLTSMEQIRRIMRPTDVPDQGLLCD 201
            |||||:.:::||.||||||||||.|::|:||.|.||||||||..:::||.:.|||.:||.|||||
plant   149 ECKRRFNVRVWKVFTDCFNCLPVAALIDDKILCMHGGLSPDLDHLDEIRNLPRPTMIPDTGLLCD 213

  Fly   202 LLWSDPDKDTIGWGENDRGVSFTFGAEVVVKFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTLFS 266
            ||||||.||..|||.||||||:|||.:.|.:||.||||||:|||||||||||||||.|||||:||
plant   214 LLWSDPGKDVKGWGMNDRGVSYTFGPDKVSEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTVFS 278

  Fly   267 APNYCGEFDNAGAMMSVDNTLMCSFQILKPVEKRKK 302
            ||||||||||||||||||..||||||||||.||:.|
plant   279 APNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKTK 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-13CNP_524921.1 MPP_PP1_PPKL 6..296 CDD:277359 227/288 (79%)
TOPP4NP_181514.1 MPP_PP1_PPKL 18..308 CDD:277359 227/288 (79%)

Return to query results.
Submit another query.