DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1-13C and ppp3cca

DIOPT Version :10

Sequence 1:NP_524921.1 Gene:Pp1-13C / 48531 FlyBaseID:FBgn0003132 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_005171933.1 Gene:ppp3cca / 557926 ZFINID:ZDB-GENE-030829-36 Length:508 Species:Danio rerio


Alignment Length:294 Identity:109/294 - (37%)
Similarity:167/294 - (56%) Gaps:30/294 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KNVQLSEGEIR-----GLCLKSREILLAQPILLELEAPLKICGDIHGQYYDLLRLFEYGGYPPEA 83
            ||..:.||.:.     .:......||..:..:||:|||:.:|||:|||::||::|||.||.|...
Zfish    45 KNHLIKEGRVEEDAALRIINDGANILRQEKCMLEVEAPITVCGDVHGQFFDLMKLFEVGGSPDNT 109

  Fly    84 NYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRYTIKLWK 148
            .|||||||||||..|:|.:..|...||.:....|||||||||..:...:.|..|||.:|:.:::.
Zfish   110 RYLFLGDYVDRGYFSIECVLFLWTLKINHPNTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYD 174

  Fly   149 TFTDCFNCLPVVAIVDEKIFCCHGGLSPDLTSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTIG 213
            ...:.|:|||:.|:::::..|.||||||::..::.||::.|..:.|..|.:|||:|:||.:|   
Zfish   175 ACMEAFDCLPLAALLNQQFLCVHGGLSPEINCLDDIRKLDRFKEPPAFGPMCDLIWADPGED--- 236

  Fly   214 WGEND----------RGVSFTFGAEVVVKFLQKHDLDLICRAHQVVEDGYEFFAKRQ------LV 262
            :|...          ||.|:.|....|..||..::|..:.|||:..:.||..:.|.|      |:
Zfish   237 YGSEKTAEHFNHNSVRGCSYFFSYAAVCDFLTNNNLLSVIRAHEAQDAGYRMYRKSQTTGFPSLI 301

  Fly   263 TLFSAPNYCGEFDNAGAMMSVDNTLM------CS 290
            |:||||||...::|..|::..:|.:|      ||
Zfish   302 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCS 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-13CNP_524921.1 MPP_PP1_PPKL 6..296 CDD:277359 109/294 (37%)
ppp3ccaXP_005171933.1 MPP_PP2B 39..343 CDD:277361 109/294 (37%)

Return to query results.
Submit another query.