DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pp1-13C and ppp5c

DIOPT Version :9

Sequence 1:NP_524921.1 Gene:Pp1-13C / 48531 FlyBaseID:FBgn0003132 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_005157433.1 Gene:ppp5c / 541536 ZFINID:ZDB-GENE-050327-75 Length:489 Species:Danio rerio


Alignment Length:250 Identity:108/250 - (43%)
Similarity:157/250 - (62%) Gaps:7/250 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LCLKSREILLAQPILLEL----EAPLKICGDIHGQYYDLLRLFEYGGYPPEAN-YLFLGDYVDRG 95
            :.::.:|:|...|.|:|:    ...:.||||.||||||||.:||....|...| |||.||:||||
Zfish   202 ILVQVKEVLTKLPSLVEITLKESEKITICGDTHGQYYDLLNIFELNSLPSPTNPYLFNGDFVDRG 266

  Fly    96 KQSLETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVV 160
            ..|:|.|..|..:|:.|.|:|.|||||||..::|::|||..|.|.:|:.:::|.|::.|..||:.
Zfish   267 SFSVEVILTLFGFKLLYPEHFHLLRGNHETDNMNQMYGFEGEVKAKYSSQMFKLFSEVFQWLPLA 331

  Fly   161 AIVDEKIFCCHGGL-SPDLTSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTIGWGENDRGVSFT 224
            ..:::|:...|||| |.|..:::.||:|.|....||.|.:||||||||.... |...:.||||..
Zfish   332 QCINDKVLVMHGGLFSEDGVTLDDIRKIDRNRQPPDSGPMCDLLWSDPQLQN-GRSISKRGVSCQ 395

  Fly   225 FGAEVVVKFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGA 279
            ||.:|..:||:::.|:.|.|:|:|..:|||.....:.:|:|||||||.:..|.||
Zfish   396 FGPDVTERFLEQNKLEYIVRSHEVKAEGYEVTHSGKCITVFSAPNYCDQMGNKGA 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-13CNP_524921.1 PTZ00480 5..299 CDD:185658 107/249 (43%)
MPP_PP1_PPKL 6..296 CDD:277359 107/249 (43%)
ppp5cXP_005157433.1 BamD 17..>149 CDD:276939
TPR_11 17..83 CDD:290150
TPR repeat 18..46 CDD:276939
TPR repeat 18..46 CDD:276809
TPR repeat 51..81 CDD:276809
TPR repeat 55..81 CDD:276939
TPR_9 62..124 CDD:290108
TPR repeat 84..116 CDD:276939
TPR repeat 86..114 CDD:276809
MPP_PP5_C 166..481 CDD:277362 107/249 (43%)
PP2Ac 194..470 CDD:197547 107/249 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.