DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pp1-13C and R13A5.11

DIOPT Version :10

Sequence 1:NP_524921.1 Gene:Pp1-13C / 48531 FlyBaseID:FBgn0003132 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001299879.1 Gene:R13A5.11 / 176075 WormBaseID:WBGene00020053 Length:459 Species:Caenorhabditis elegans


Alignment Length:210 Identity:46/210 - (21%)
Similarity:67/210 - (31%) Gaps:72/210 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 LVFSI----VCFIVLREDNVSPKQTEDDEEPNPEKKKKGGLRTIVGSIVIWHISFVYLFTMEMRT 227
            :||.:    ...|.|.:.|...|::..|:.....||.|.           |:            |
 Worm   111 MVFDLEKHSTLHIDLAKSNPKSKRSRTDDGWESLKKLKS-----------WN------------T 152

  Fly   228 ICETWVQLFLTDSKISPDAFQITYEIGGLVGTMASGIVIDLATRKFDVDATRRVIAVSYTCLMMF 292
            ..|:....|.|     |......|...|.....:.||. ::|.|   ...:|:....:..|..:|
 Worm   153 TTESGFGSFQT-----PGMSSSAYNTIGYSPAQSQGIA-NVAGR---APTSRKPSKAADPCPTLF 208

  Fly   293 SA---AGIFEFAELSSIF----GFLAGMFVNGSINVWCMIASQAGFSKIQGTVSAFISFI----- 345
            .|   ....| |||..:|    |||.                    .|||||....::|:     
 Worm   209 IANMGPNCTE-AELIQVFSRCRGFLK--------------------LKIQGTYGTPVAFVDFQDV 252

  Fly   346 -ASSGSM--LAGTPL 357
             .||.::  |.||.|
 Worm   253 SCSSEALHTLQGTVL 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pp1-13CNP_524921.1 MPP_PP1_PPKL 6..296 CDD:277359 26/135 (19%)
R13A5.11NP_001299879.1 PP2Ac 164..437 CDD:197547 31/129 (24%)

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