DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNOT3 and Cnot3

DIOPT Version :10

Sequence 1:NP_001427582.1 Gene:CNOT3 / 4849 HGNCID:7879 Length:771 Species:Homo sapiens
Sequence 2:XP_036008812.1 Gene:Cnot3 / 232791 MGIID:2385261 Length:931 Species:Mus musculus


Alignment Length:741 Identity:687/741 - (92%)
Similarity:697/741 - (94%) Gaps:19/741 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    31 KLHNAANANQKEKYEADLKKEIKKLQRLRDQIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVE 95
            :|||||||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||
Mouse   210 QLHNAANANQKEKYEADLKKEIKKLQRLRDQIKTWVASNEIKDKRQLIENRKLIETQMERFKVVE 274

Human    96 RETKTKAYSKEGLGLAQKVDPAQKEKEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDK 160
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   275 RETKTKAYSKEGLGLAQKVDPAQKEKEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDK 339

Human   161 DQKQDRIEGLKRHIEKHRYHVRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEF 225
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   340 DQKQDRIEGLKRHIEKHRYHVRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEF 404

Human   226 LYDDLDLEDIPQALVATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRG 290
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   405 LYDDLDLEDIPQALVATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRG 469

Human   291 RSTDSEVSQSPAKNGSKPVHSNQHPQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAAPPSALG 355
            ||||||||||||||||||||||||||||||||||||||||..||||:||||||...||||.||||
Mouse   470 RSTDSEVSQSPAKNGSKPVHSNQHPQSPAVPPTYPSGPPPTTSALSSTPGNNGASTPAAPTSALG 534

Human   356 PKASPAPSHNSGTPAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGSGGGGSSSSSNSSAGGG 420
            ||||||||||||||||||||||||..||||..||||||.|||||.||||  |||||:|||..|||
Mouse   535 PKASPAPSHNSGTPAPYAQAVAPPNASGPSNAQPRPPSAQPSGGSGGGS--GGSSSNSNSGTGGG 597

Human   421 AGKQNGATSYSSVVADSPAEVALSSSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPTGAGGVA 485
            |||||||||||||||||||||.||||||::||||||||.||||||.||||||.|.|||:|||.||
Mouse   598 AGKQNGATSYSSVVADSPAEVTLSSSGGSSASSQALGPTSGPHNPAPSTSKESSTAAPSGAGNVA 662

Human   486 PGSGNNSGGPSLLVPLPVNPPSSPTPSFSDAKAAGALLNGPPQFSTAPEIKAPEPLSSLKSMAER 550
            .||||||||||||||||||||||||||||:|||||.||||||||||.||||||||||||||||||
Mouse   663 SGSGNNSGGPSLLVPLPVNPPSSPTPSFSEAKAAGTLLNGPPQFSTTPEIKAPEPLSSLKSMAER 727

Human   551 AAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGVCPLGPVPLTKEQLYQ 615
            |||||||||||||||||:||||||||||||.|:|||||||||||||||||||||||.||||||||
Mouse   728 AAISSGIEDPVPTLHLTDRDIILSSTSAPPTSSQPPLQLSEVNIPLSLGVCPLGPVSLTKEQLYQ 792

Human   616 QAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLE 680
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   793 QAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLE 857

Human   681 GTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQIPDHLLVHSLTAFSPGQGTYIYF 745
            |||||||||||||||||||||||||||||||||||||||||                 |||||||
Mouse   858 GTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFE-----------------QGTYIYF 905

Human   746 DYEKWGQRKKEGFTFEYRYLEDRDLQ 771
            ||||||||||||||||||||||||||
Mouse   906 DYEKWGQRKKEGFTFEYRYLEDRDLQ 931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNOT3NP_001427582.1 None
Cnot3XP_036008812.1 Not3 211..409 CDD:461155 196/197 (99%)
Herpes_BLLF1 <477..744 CDD:282904 237/268 (88%)
NOT2_3_5 798..923 CDD:461199 124/141 (88%)

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