DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip91 and Tubgcp6

DIOPT Version :9

Sequence 1:NP_524919.2 Gene:Grip91 / 48481 FlyBaseID:FBgn0001612 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_001102218.2 Gene:Tubgcp6 / 362980 RGDID:1307743 Length:1763 Species:Rattus norvegicus


Alignment Length:488 Identity:96/488 - (19%)
Similarity:175/488 - (35%) Gaps:130/488 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   463 LPMLP---KFVPMDMANKILMTGKSINFLREICEEQGMMKERDELMKVMESSASQI--------F 516
            ||..|   :.||...|.:....||...:|.::.:...:.:..|....:.|...:.:        |
  Rat  1335 LPSSPGPSEEVPSTEAEEARRWGKEQAYLADLTKLYRLEQYPDSYESMSEPPMAHLVHHMLPRAF 1399

  Fly   517 SYTPDTSWHAAVETCYQQTSK------------------HV-------LDIMVGPHKLLDHLHGM 556
            ::..|....:||:....|.|:                  ||       :|.......|..|...:
  Rat  1400 AFPVDPQVQSAVDESAVQLSELLTLPVLMKRSLMAPLAAHVSLVNKAAVDYFFVELHLETHFEAL 1464

  Fly   557 RRYLLLGQGDFISILIENMKNEL---ERPGLDIYANDLTSMLDSALR---------CTNAQY--- 606
            |.:||:..|:|...|.:.:..:|   :.||..:....|.|:|..||:         .||..:   
  Rat  1465 RHFLLMEDGEFAQSLSDLLFEKLGAGQTPGELLNPLVLNSILSKALQYSLHGDTPHATNLSFALK 1529

  Fly   607 --------DDPDILNHLDVIVQRPFNGDIGWNIISLQYIVHGPLAAML-ESTMPTYKVLFKPLWR 662
                    :.||:|:.|:                 |:|.|..||..:: ||.:..|..:|..|.:
  Rat  1530 YLPEVFAPNAPDVLSCLE-----------------LRYKVDWPLNIVITESCLNKYSGIFSFLLQ 1577

  Fly   663 MKHMEFVLSMKIWKEQMGNAKALRTMKSEIGKASHR-LNLFTSEIMHFIHQMQYYVLFEVIECNW 726
            :|.|.:.|     |:...:.|....:....|....| |.||..|:.||:..:|.|:..:::..:|
  Rat  1578 LKLMMWTL-----KDICFHLKRTALVSHTAGSVQFRQLQLFKHEMQHFVKVIQGYIANQILHVSW 1637

  Fly   727 VELQKKMQKATTLDEILEAHEKFL-QTILVGCFVSNKASVEHSLEVVYENIIELEKWQSSFYKDC 790
            .|.:.::.....|:||..||.::| :.:..|......|.|.:.:..::..:::..          
  Rat  1638 CEFRARLAVVGDLEEIQRAHAEYLHRAVFRGLLTEKAAPVMNIIHSIFSLVLKFR---------- 1692

  Fly   791 FKELNARKELSKIVEKS--EKKGVYGLTNKMILQRDQEAKIFAEKMDIACRGLEVIATDYEKAVS 853
                      |:::.::  ...|..|..:.......|....|                   |..|
  Rat  1693 ----------SQLISQNWGPATGPRGAEHPNFPLMQQSYSTF-------------------KYYS 1728

  Fly   854 TFLMS-----LNSSDDPNLQLFGTRLDFNEYYK 881
            .||..     :|....|:|:.|..|::||.||:
  Rat  1729 HFLFKVVTKLVNRGYQPHLEDFLLRINFNNYYQ 1761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grip91NP_524919.2 Spc97_Spc98 236..758 CDD:282045 76/356 (21%)
Tubgcp6NP_001102218.2 GCP_N_terminal 352..612 CDD:407574
TPH 628..>805 CDD:404709
DUF4573 1044..1199 CDD:405774
Spc97_Spc98 1460..1760 CDD:398000 73/360 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2000
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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