DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip91 and Tubgcp6

DIOPT Version :9

Sequence 1:NP_524919.2 Gene:Grip91 / 48481 FlyBaseID:FBgn0001612 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_001156791.1 Gene:Tubgcp6 / 328580 MGIID:2146071 Length:1769 Species:Mus musculus


Alignment Length:1121 Identity:198/1121 - (17%)
Similarity:366/1121 - (32%) Gaps:378/1121 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 EVHEKA----MDHLSKMIAANSRVIRDSN-----------------MLTERECVQKIMKLLSARN 79
            |:..||    :||.||:.|..:|  |:..                 :|.:::|:|::::.:.|:.
Mouse   750 ELERKARQALVDHYSKLSAEAAR--REQKALWRIQRHRLESARLRFLLEDQKCIQEMLRDMEAQQ 812

  Fly    80 KKE---------------------EGKTVSDHFNELYRKLTLTKC--DPHMRHSL---------- 111
            .:|                     ||.:....|.||:.......|  .|.:..|.          
Mouse   813 PQEPPSVFPSTGSQVTSTGPEHAGEGHSCDPGFTELHWGCPSLPCASTPSVPKSATEGADDSGAG 877

  Fly   112 -MTHLLTMTD----NSDAEKAVASEDP-------RTQCDNL------------------------ 140
             .:..|::||    :|..|:.|.:...       :|.|.:|                        
Mouse   878 PFSTGLSITDFLPVDSGEEQPVENTGVPFLEVALQTICSDLSPVAPEPAALTAGGPQATQSEYDF 942

  Fly   141 ---------TQILVSRLNSISSSIAS-----LNEMGVVNGNGVGAAAVTGAA--AVTGAAAVTGA 189
                     |.:.......:.:|:.|     |.:|.....:.:.....|...  .::.|..|.|:
Mouse   943 NTILRPAMATSLSPGPFQDVQNSVDSDKQHLLGDMSTKVDSYIHDMQETLPCPHPLSHATPVEGS 1007

  Fly   190 AAVTGAAASHSYDATQSSIGLRKQSLPNYLDATKMLPESRHDIVMSAIYSFTGVQ-GKYLKKDVV 253
            ....|....|..:.|.|:     :|..:.:...:.|..|||       .|...:: |.|: .||.
Mouse  1008 LQPVGQLLEHMSETTVST-----ESHASGMAPCQQLSISRH-------VSDANIKVGDYM-SDVA 1059

  Fly   254 TGRFKLDQQNIK-FLTTGQAGMLLRLSEL----------GYYHDRVVK----FSDVS---TGFNA 300
            ..|   .:.|:. .::....|:...::|:          |:..|..:|    .|||:   |.:|.
Mouse  1060 LPR---PRWNVHGHVSEASIGVGENMAEVAPSRPRWNVHGHVSDASIKIGENMSDVAPSRTRWNI 1121

  Fly   301 IGSMGQALISKLKEELA---------NFHGQVA--------MLHDEMQRFRQASVNGIANKGKKD 348
            .|.:..|.| |:.|.::         |.||.|:        .:.|......:.:|:|..::....
Mouse  1122 HGHVSDASI-KVGENVSDVTPSRPRWNVHGHVSEASIKVGENVSDVTPSRPRWNVHGHVSEASIK 1185

  Fly   349 SGPDAGDEMTLFKLLAWYIKPLHRMQWLT--KIADACQVKKGGDLASTVYDFLDNGNDMVNKLVE 411
            .|.:..|           :.| .|.:|..  .::|| .::.|.:::.|..|....|......::|
Mouse  1186 VGENVSD-----------VTP-SRPRWNVHGHVSDA-SIRIGENVSDTDLDLQQRGCAQPPLILE 1237

  Fly   412 DLLTAI-----------------------------CGPLVRMISKWIL--------EGGI----- 434
            :.|...                             |||.:...:|..:        ||.:     
Mouse  1238 EPLPEAEADLKPHQCPPAHVSEAVLGVEAQSPALECGPQLPEKTKPTVCSGFGRTEEGSLQTKTL 1302

  Fly   435 --------SDMHREFFVKSIKDVGVDRLWHDKFRLRLPMLPKFVPMDMA--------NKILMT-- 481
                    |.:..|      |..|..|...|    ..|.||.....|.|        :::..|  
Mouse  1303 VAEPSMLGSGIPEE------KGPGKSRDAED----LSPCLPSSSQEDTAVPSSPGPSDEVSNTEA 1357

  Fly   482 -----GKSINFLREICEEQGMMKERDELMKVMESSASQI--------FSYTPDTSWHAAVETCYQ 533
                 ||...:|.::.:...:.:..|....:.|...:.:        |::..|....:||:....
Mouse  1358 EARRWGKEQAYLTDLTKLYHLEQYPDSYDSMSEPPVAHLVHHMLPRAFAFPVDPQVQSAVDESAV 1422

  Fly   534 Q-------------------------TSKHVLDIMVGPHKLLDHLHGMRRYLLLGQGDFISILIE 573
            |                         .||..:|.......|..|...:|.:||:..|:|...|.:
Mouse  1423 QLSELLTLPVLMKRSLMAPLAAHVSLVSKAAVDYFFVELHLETHFEALRHFLLMEDGEFAQSLSD 1487

  Fly   574 NMKNEL---ERPGLDIYANDLTSMLDSALR---------CTNAQY-----------DDPDILNHL 615
            .:..:|   :.||..:....|.|:|..||:         .:|..:           :.||:|:.|
Mouse  1488 LLFEKLGAGQTPGELLNPLVLNSILSKALQYSLHGDTPHASNLSFALKYLPEVFAPNAPDVLSCL 1552

  Fly   616 DVIVQRPFNGDIGWNIISLQYIVHGPLAAML-ESTMPTYKVLFKPLWRMKHMEFVLSMKIWKEQM 679
            :                 |:|.|..||..:: ||.:..|..:|..|.::|.|.:.|     |:..
Mouse  1553 E-----------------LRYKVDWPLNIVITESCLNKYSGIFSFLLQLKLMMWTL-----KDIC 1595

  Fly   680 GNAKALRTMKSEIGKASHR-LNLFTSEIMHFIHQMQYYVLFEVIECNWVELQKKMQKATTLDEIL 743
            .:.|....:....|....| |.||..|:.||:..:|.|:..:::..:|.|.:.::.....|:||.
Mouse  1596 FHLKRTALVSHTAGSVQFRQLQLFKHEMQHFVKVIQGYIANQILHVSWCEFRARLAVVGDLEEIQ 1660

  Fly   744 EAHEKFL-QTILVGCFVSNKASVEHSLEVVYENIIELEKWQSSFYKDCFKELNARKELSKIVEKS 807
            .||.::| :.:..|......|.|.:.:..::..:::..                    |:::.::
Mouse  1661 RAHAEYLHRAVFRGLLTEKAAPVMNIIHSIFSLVLKFR--------------------SQLISQN 1705

  Fly   808 --EKKGVYGLTNKMILQRDQEAKIFAEKMDIACRGLEVIATDYEKAVSTFLMS-----LNSSDDP 865
              ...|..|..:.......|....|                   |..|.||..     :|....|
Mouse  1706 WGPATGPRGAEHPNFPLMQQSYSTF-------------------KYYSHFLFKVVTKLVNRGYQP 1751

  Fly   866 NLQLFGTRLDFNEYYK 881
            :|:.|..|::||.||:
Mouse  1752 HLEDFLLRINFNNYYQ 1767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grip91NP_524919.2 Spc97_Spc98 236..758 CDD:282045 128/683 (19%)
Tubgcp6NP_001156791.1 Spc97_Spc98 355..>611 CDD:282045
NBP1 <622..>752 CDD:285709 1/1 (100%)
ARGLU 631..759 CDD:291991 3/8 (38%)
Ehrlichia_rpt 672..1249 CDD:118064 92/530 (17%)
DUF4200 689..785 CDD:290574 10/36 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 809..842 4/32 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 859..881 2/21 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1284..1360 14/85 (16%)
Spc97_Spc98 <1403..1667 CDD:282045 61/285 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2000
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.