DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dip-B and loopin-1

DIOPT Version :10

Sequence 1:NP_650318.1 Gene:Dip-B / 48450 FlyBaseID:FBgn0000454 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_611134.1 Gene:loopin-1 / 36847 FlyBaseID:FBgn0259795 Length:526 Species:Drosophila melanogaster


Alignment Length:357 Identity:81/357 - (22%)
Similarity:134/357 - (37%) Gaps:102/357 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 GVGDPERMTPIQVEKYIKPLFDKLNVNV---ISDTQVLQKEYPLF--AAVN-----------RAA 226
            |.||.        :.:::.||...:.|:   :|||........:|  |||:           |:.
  Fly   187 GKGDR--------DAWVRGLFKAESQNLARRLSDTPANMMTPSIFAQAAVDALCPCGVSVEVRSM 243

  Fly   227 DAVERHRGRIIFLEYK----PP----------KPARKTLMLVGKGVTYDTGGADIKAGGVMAGMS 277
            |.:|........:..|    ||          .|..:.::|:|:|:|:.:||..:|.   ..||.
  Fly   244 DWIEDMNLNSFLMIAKGSCEPPLLLECSYCGTTPEDRPVLLLGQGLTFHSGGLCLKP---KTGMD 305

  Fly   278 RDK---CGAAAVAGFMQVVSQLQ-PDDIHVVAALC-MVRNSVGEECYVADEVITSRAGLHVRIGN 337
            :.:   .|||...|.::..:.|. |.:|..|..|| .:.:.:..:|   .:|:|...|..:.|.|
  Fly   306 QYRGAMAGAAVCVGVLRAAAALSLPLNITAVMPLCEHMPSGMAVKC---GDVVTLLNGTTMGIKN 367

  Fly   338 TDAEGRMCMTDALCRMKELVVEQNLPDPHLFTIATLTGHAFISAGE---GQSIAIDNSVAHREDH 399
            .|              |..||:  |.||.|:..||......|..|.   |.:.|:...       
  Fly   368 VD--------------KAPVVQ--LADPLLYAQATYKPKLVIDIGTVAMGVNYAVGGG------- 409

  Fly   400 ARRLQAAGQAFGEPFEVS-------ILRPSDFSFN---AGKVIGEDLVQANNAPSVRTPRGHQVP 454
            |..|....::..:.|..|       :.|...|.:.   ..|.|..||        ..|.||   |
  Fly   410 ASGLWTTSKSVWQNFRKSGGLTGDRVWRFPLFKYYKQIVNKNITYDL--------CNTGRG---P 463

  Fly   455 AAFMIKASGLDKHGLDSMLP-IKYTHIDIAGS 485
            |:..:.|:     .|.:::| .::.|:||.|:
  Fly   464 ASSCLAAA-----ILHTLVPCAEWAHLDIRGT 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dip-BNP_650318.1 Peptidase_M17 58..502 CDD:238247 81/357 (23%)
loopin-1NP_611134.1 Peptidase_M17_N 44..173 CDD:426984
Peptidase_M17 206..514 CDD:459978 75/330 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.