DRSC/TRiP Functional Genomics Resources

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Protein Alignment CkIIalpha and cdk-2

DIOPT Version :9

Sequence 1:NP_001036624.1 Gene:CkIIalpha / 48448 FlyBaseID:FBgn0264492 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001021537.2 Gene:cdk-2 / 171911 WormBaseID:WBGene00019362 Length:338 Species:Caenorhabditis elegans


Alignment Length:311 Identity:94/311 - (30%)
Similarity:167/311 - (53%) Gaps:34/311 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VRKLGRGKYSEVFEAINITTTEKCVVKILKPVKKKK-----IKREIKILENLRGGTNIITLLAVV 99
            :|::|.|.|..||:||::....||.:|:::..:.::     ..|||..:::|: ..||:||..::
 Worm    18 LRRIGEGTYGVVFKAIHVRDNVKCALKMIRTDRDEEGIPSTCLREISCIKDLQ-HDNIVTLFDII 81

  Fly   100 KDPVSRTPALIFEHVNNTDFKQLYQTL--------TDYEIRYYLFELLKALDYCHSMGIMHRDVK 156
            .  .:....::||.::. |.|.|.:.|        .:| ::.::::||.||.|||...|:|||:|
 Worm    82 Y--ANSKLYMVFEFIDR-DLKNLLEMLEPTNSVLPPNY-VKSFMWQLLSALSYCHLRRIVHRDLK 142

  Fly   157 PHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220
            |.|:::. ::..:::.|:||| .|..|.:.|...|.:.:::.||:|:..|.|..|||||||||:.
 Worm   143 PQNILVS-DSGVIKIADFGLARNFSFPSRNYTHEVVTLWYRPPEILLGSQRYSTSLDMWSLGCIF 206

  Fly   221 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELYAYLDKYNIDLDPRFHDILQRHSRKRWE-RFVH 284
             |.|...:|.|.|.....||.:|.:::||..:.::   ..:|..|.:..:.     .:|. ....
 Worm   207 -SEIASNKPLFPGECEISQLFKIFEIVGTPNIKSW---PGVDSFPHYKAVF-----PQWPVNLKK 262

  Fly   285 SDNQHLVSPEALDFLDKLLRYDHVDRLTAREAMAHPYFLPIVNG--QMNPN 333
            .:....::...||.|.::|||....||||:.|::|.|||.  ||  |..|:
 Worm   263 LEETSCLTGNGLDVLREILRYPPERRLTAKGALSHRYFLQ--NGFTQNRPS 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIalphaNP_001036624.1 STKc_CK2_alpha 18..322 CDD:271034 87/296 (29%)
cdk-2NP_001021537.2 STKc_CDK_like 15..300 CDD:270823 87/296 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S214
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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