DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acph-1 and Acp4

DIOPT Version :10

Sequence 1:NP_733332.1 Gene:Acph-1 / 48445 FlyBaseID:FBgn0000032 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_063117957.1 Gene:Acp4 / 308569 RGDID:1308270 Length:525 Species:Rattus norvegicus


Alignment Length:393 Identity:79/393 - (20%)
Similarity:121/393 - (30%) Gaps:162/393 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 ITYSLQPLIAIEVLLNPMCDTHQYVAQLINLKRLKGFTYARLYCELMRGCLIALNNVEGTAKESL 320
            ||...||..|.|.  :..|.|.::                |.:.:|||  |.|:       |..:
  Rat    24 ITAHQQPSTATEE--SEQCSTCEF----------------RQHSKLMR--LHAI-------KSQI 61

  Fly   321 LCAFAFIKVPHI----LHQLHAKT------------------NGAEQQDEATGATYSVEVLEAFE 363
            |......:.|:|    :.||..|.                  :||.::|:....|.::     ..
  Rat    62 LSKLRLKQAPNISRDVVKQLLPKAPPLQQLLDQYDVLGDDSKDGAVEEDDEHATTETI-----MT 121

  Fly   364 LLLQDTPVLDYMDMKCACNVVECLLKEMVKLQLLTDTHVKQLVALRE---------------PV- 412
            :..:..|::. :|.|..|    |......|:|.......:..|.||.               || 
  Rat   122 MATEPDPIVQ-VDRKPKC----CFFSFSPKIQANRIVRAQLWVHLRPAEEATTVFLQISRLMPVK 181

  Fly   413 TAGLH-----KLDANSAPLTMMLKFVFRVESPLAGILKALSTDCSKVQDALLAMLCQVLTGNSLD 472
            ..|.|     |:|.|                  ||:....|.|   |:..|...|.|..|...::
  Rat   182 DGGRHRIRSLKIDVN------------------AGVTSWQSID---VKQVLTVWLKQPETNRGIE 225

  Fly   473 LVLSVASVEGKFKAFISGLLKCNDYAKQAT-TAEIGKAPTTRSALFDVSFMILASIAQSYGSDVI 536
            :           .|:.:   |.||.|..:| |.|.|..|          ||   .:..|.|...|
  Rat   226 I-----------NAYDA---KGNDLAVTSTETGEDGLLP----------FM---EVKISEGPKRI 263

  Fly   537 LAEGG-----NSF------------FEKWVRDYMVERKKTKS---------------PMT-MVKQ 568
            ..:.|     ||.            ||.:..|:::..|:.|:               |.| :|.:
  Rat   264 RRDSGLDCDENSSESRCCRYPLTVDFEDFGWDWIIAPKRYKANYCSGECDYMYLQKYPHTHLVNK 328

  Fly   569 ADP 571
            |.|
  Rat   329 ASP 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acph-1NP_733332.1 HP_HAP_like 64..361 CDD:132717 25/126 (20%)
Acp4XP_063117957.1 None

Return to query results.
Submit another query.