DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kebab and Ndc80

DIOPT Version :10

Sequence 1:NP_001259900.1 Gene:Kebab / 48440 FlyBaseID:FBgn0028952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_572902.1 Gene:Ndc80 / 32316 FlyBaseID:FBgn0030500 Length:675 Species:Drosophila melanogaster


Alignment Length:582 Identity:117/582 - (20%)
Similarity:193/582 - (33%) Gaps:240/582 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 KTPEFRSRTNKTIPASEPRPRRAKELLEDLRSKHQGTPATKIPSQRNPKENQELSKSHTCIPSSE 174
            :|.|||....:....::.|..||.:     ||....||::...:.|.|.            .|..
  Fly     8 RTSEFRGDVLEERGTADKRQTRATK-----RSAATHTPSSSQAAPRRPS------------ASRL 55

  Fly   175 PQPIRPKLILERERQESITNRLASTSIDRLKTKPPRSSFTSSRLLVPQMGFSYPKDPKRLHESDK 239
            |||:.    |||:|                               ..|||.:    |||.|.   
  Fly    56 PQPLN----LERDR-------------------------------ASQMGVT----PKRGHR--- 78

  Fly   240 GIKLTTSKRKLDFKTELGTDWLRRELEKIGKEWRKKTDYQLRQLISGF----------------- 287
             ...:|::|.:...::              |:|..:...|:.:.:.|.                 
  Fly    79 -FVPSTAERAIAPHSD--------------KKWVAERAQQILEYLHGIQNSEAPTGLIADLFSRP 128

  Fly   288 -------VKQLVRLLPFNGITFSHLSRD------CYVQQMVEALQQLQYTKKVNKSWLQTPNSTQ 339
                   :||.|.:|.|   .|.|:.|:      .:|:.:..|:|:|||..:||||||.:|.:..
  Fly   129 GGLRHMTIKQFVSILNF---MFHHIWRNRVTVGQNHVEDITSAMQKLQYPYQVNKSWLVSPTTQH 190

  Fly   340 AIAHVLELLNFLLDVL------------------------------------------------- 355
            :..||:.||:||:|.|                                                 
  Fly   191 SFGHVIVLLDFLMDFLPPLPSSDVVEEEFPFMETMEQPSSYLNSMHCESTTIMSTTQAHAIQLDE 255

  Fly   356 -----------------------EHRKGEG---------MCALPVVSEKQRIEQLASASGTSYDV 388
                                   |..|.:.         .|.||   :::.::||.....|.  :
  Fly   256 DVNGLLFEEASKCIALWDQELTNEEAKLQAETRDQVISKKCDLP---DRKALDQLIGDLKTK--L 315

  Fly   389 MSLQQKF----ENIKIEK-ERLNNYQESLMPESPVSKD------------MDKVTERDGN----- 431
            ..|:.|.    |:.|:.| |||....:.|..:...|::            ..:|.|:..|     
  Fly   316 QQLENKLHDPSEDNKLNKLERLTKEHDQLAQQLAASEEELIKKLKLYEQLSAQVEEKQSNLRQQM 380

  Fly   432 ------QDFVRLLDFQKETLHELQLQ-----------RLRLQEFSELVSLAKIKLKRCCKANKQC 479
                  :..|....|..:.|.|||::           ..:::|.|||....::.|.|..:.....
  Fly   381 KYEKRLEQAVNRQKFSAQQLKELQMKCDDMENYSKAYERQVKEVSELELHQQVMLSRAKQKQLDS 445

  Fly   480 IEAFNDQIQDLA-DCVV--LRNRNIGLLTQLHLNDNPKEEELHERMKQLQRLYEDNYSNLLQ 538
            :|.||..::.|: |.|:  |....||..:.|.|..||.:|::.||::.|:.|     ..|||
  Fly   446 VEVFNSHVRHLSMDPVICGLIKSGIGQQSDLTLPLNPNQEDISERVQCLELL-----GKLLQ 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KebabNP_001259900.1 None
Ndc80NP_572902.1 Ndc80_HEC 48..204 CDD:461058 50/227 (22%)
SMC_N 310..>661 CDD:481474 47/200 (24%)

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