DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5707 and AT4G12830

DIOPT Version :10

Sequence 1:NP_001246563.1 Gene:CG5707 / 48422 FlyBaseID:FBgn0026593 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_567394.1 Gene:AT4G12830 / 826895 AraportID:AT4G12830 Length:393 Species:Arabidopsis thaliana


Alignment Length:340 Identity:64/340 - (18%)
Similarity:129/340 - (37%) Gaps:63/340 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ISQLQWI--HNRLSIGAQNKEPMDVRIDMPWGYVVG----------KWY----GNRQVRPILALH 52
            :.|.:|:  |.....|.:.|:|:       :|..:|          :|:    |:....|::.:|
plant    83 LKQGKWVKAHRVGGSGVEAKDPI-------FGLTMGASSQASKDLFRWFSVESGSVDSPPVILIH 140

  Fly    53 GWLDNLGTWDKLLPLLPKHLGVLCIDLPGHGYSSKLPEGIAYHFV--DYLCVILRVMEEYRWQKV 115
            |:.....::.|.:|:|.|:...:..|..|.|:|.|...|..:::.  :::..:...::|....||
plant   141 GFPSQAYSYRKTIPVLSKNYRAIAFDWLGFGFSDKPQAGYGFNYTMDEFVSSLESFIDEVTTSKV 205

  Fly   116 SLMAHSMSAMLCFVFASLYPHRTDMLVSIDIVKT-RYRKPPSQIDYLRKNIEGYIVEDE--RFAN 177
            ||:.....:.....:|...|.:...|:.::...| .:.|.||.:......:.|.|...:  |.::
plant   206 SLVVQGYFSAAVVKYARNRPDKIKNLILLNPPLTPEHAKLPSTLSVFSNFLLGEIFSQDPLRASD 270

  Fly   178 SKRQEPPAYTYTEMEQVLYK-------GTDYSVELENCRHILERNISRSTKFPAKFFFSRDGRCK 235
            ........|...|.:.::|:       .:.:::..          ||||.|...|         |
plant   271 KPLTSCGPYKMKEDDAMVYRRPYLTSGSSGFALNA----------ISRSMKKELK---------K 316

  Fly   236 YYTEFHTSPPFAAELARTIKNVPYCVIKGSESNYIDEQSDEVIGILRENNPHFELHEVQGTHHVH 300
            |..|..||      |......:|..|..|....::   |.|.:....:::.|..:......|||.
plant   317 YAEEMRTS------LMDKNWKIPITVCWGQRDRWL---SYEGVEEFCKSSGHNLVELPNAGHHVQ 372

  Fly   301 LNNAQGVAAVINPFI 315
            .:..:.:..:|:..|
plant   373 EDCGEELGGIISRII 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5707NP_001246563.1 MenH 46..>165 CDD:440361 25/121 (21%)
Abhydrolase_6 48..310 CDD:463673 51/273 (19%)
AT4G12830NP_567394.1 PLN03084 1..389 CDD:178633 64/340 (19%)

Return to query results.
Submit another query.