DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5707 and abhd4

DIOPT Version :9

Sequence 1:NP_001246563.1 Gene:CG5707 / 48422 FlyBaseID:FBgn0026593 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_001017287.1 Gene:abhd4 / 550041 XenbaseID:XB-GENE-921768 Length:342 Species:Xenopus tropicalis


Alignment Length:338 Identity:72/338 - (21%)
Similarity:132/338 - (39%) Gaps:56/338 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SISQLQWIHNRLSIGAQNKEPMDVRIDMP-----WGYVVGKWYGNRQVRPILALHGWLDNLGTWD 62
            |:|:|:.:.:|:....:||..... :.:|     |...|....  ::..|::.:||:...:|.|.
 Frog    24 SMSKLKAVESRILQCIKNKFSAQY-VSLPDQNKIWTLTVSPEL--QKKTPLVMVHGFGGGIGLWI 85

  Fly    63 KLLPLLPKHLGVLCIDLPGHGYSSKL-----PEGIAYHFVDYLCVILRVMEEYRWQ----KVSLM 118
            :.|..|.....:...||.|.|.||:.     |||....||..:       |::|.|    .:.|:
 Frog    86 QNLDHLSSSRTLHAFDLLGFGRSSRPNFPSDPEGAEEQFVSSI-------EQWREQMGIRNMILL 143

  Fly   119 AHSMSAMLCFVFASLYPHRTDMLVSID--------IVKTRYRKPPSQIDYLRKNIEGYIVEDERF 175
            .||:...|...::..:|.|...|:.:|        ...:..|.||:.:    |.:...:......
 Frog   144 GHSLGGFLAASYSIKFPERVKHLILVDPWGFPTMPTDPSEIRSPPTWV----KALAAVLGRSNPL 204

  Fly   176 ANSKRQEP--PAYTYTEMEQVLYKGTDYSVE---LENCRHILERNISRSTKFPAKFFFSRDGRCK 235
            |..:...|  |.........:..|..:|..:   :|...|...:..|..:.|  |....|.|..|
 Frog   205 AVVRAAGPWGPGLVQRFRPDLKRKFQEYFEDDTIMEYIYHCNAQTPSGESAF--KTMMERFGWAK 267

  Fly   236 YYTEFHTSPPFAAELARTIKNVPYCVIKGSESNYIDEQSDEVIGILRENNPHF-ELHEVQG-THH 298
                    .|..:.:.:..|::|...|.|:|: :||..:.|  .:..|.:..| :...::| :||
 Frog   268 --------RPMMSRINQIPKDLPITFIYGAET-WIDRSTGE--RVKEERSDSFVKTLAIKGASHH 321

  Fly   299 VHLNNAQGVAAVI 311
            |:.:......||:
 Frog   322 VYADQPGTFNAVV 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5707NP_001246563.1 MhpC 46..318 CDD:223669 63/290 (22%)
abhd4NP_001017287.1 Abhydrolase 54..>169 CDD:304388 30/123 (24%)
MhpC 68..336 CDD:223669 63/291 (22%)
Abhydrolase <141..211 CDD:304388 13/73 (18%)
DHR2_DOCK <230..>338 CDD:297424 26/118 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.