DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3558 and fhip2b

DIOPT Version :9

Sequence 1:NP_001137777.1 Gene:CG3558 / 48421 FlyBaseID:FBgn0025681 Length:1049 Species:Drosophila melanogaster
Sequence 2:NP_001072514.1 Gene:fhip2b / 779969 XenbaseID:XB-GENE-5801105 Length:698 Species:Xenopus tropicalis


Alignment Length:861 Identity:170/861 - (19%)
Similarity:310/861 - (36%) Gaps:255/861 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWLRQSSGGGVASVGHVGPLRQRPIDAATDCDP-RACYDSFCKHW----QQAFEIIQHSAPPSHD 60
            ||            |.:|...|:.::..   :| :....||.:||    |...|....|.|....
 Frog     1 MW------------GRLGAFLQQAVETR---EPTQDLLQSFIQHWKGVTQYYLETSDESCPARET 50

  Fly    61 DVLGVVSHLDYMVTLLLVELHHCNKVSLPAAE----ASGPPAAPCLEFLLSENLLDKLYEWACTT 121
            |   :...|..::.:|:.|..: |...|.:.:    .:|..|.||:|:||...:|:.|    ||.
 Frog    51 D---IPWRLRQLIDILVFEESN-NGSQLSSGDEEDSGAGSHAGPCMEYLLQHKILETL----CTL 107

  Fly   122 GR--YANAVRLEQLKLYELLVSHSRHQLLCHEPFLRPLLKILASSQGEIFPPDLEKRLVILLNQL 184
            .:  |...:|.:.|..|..|::..:..||.:....||:.|::|.::..: ....:|..:..|..:
 Frog   108 AKAEYPPGMRQQVLLFYSRLLAKVQRPLLHYLSVHRPVQKLIALAEDPV-GATAQKEELQFLTAV 171

  Fly   185 CVVLMQN----VHLLDLFFFSAQTQVQ----EQILNGNVAPPKSGTTTNFIIFSLLIPYVHREGS 241
            |..|.::    ||:|:   ..:.::|:    ||  :|...........| :..:||.....::|.
 Frog   172 CTKLEKDPSLLVHVLE---EGSGSRVRCSGGEQ--DGETEARNHKPRQN-LFKALLRLCTCQKGR 230

  Fly   242 LGHQARDALLLCMALSQK--------NSNIGTYIAQYSSICPLLVTGLGGLYSRLPNSIE----- 293
            |..:||:|||..:..:|:        .|.:..|:.::  :|.        |:..:|.||.     
 Frog   231 LCVRAREALLRVLHSAQQEGPVHLIVQSKLSQYVTEH--LCE--------LHRCIPLSIHPCDIT 285

  Fly   294 -ISSIDWHRIT---PDDVTEIPELTL--FMNALEFCNAVVQVAHEMIKQQLLDFMYQGFIVPVLG 352
             :...||.:.:   ..|..|..|..|  |:..:|:|:.:|:.:||::..::...:.:|::..:|.
 Frog   286 ALQETDWRKDSGSQESDGMENAEAALQRFLCWVEYCDCLVRESHEVVAMEITRSIKEGYLQGILQ 350

  Fly   353 PAILQTLKGKHFQTNIDSQISAM---SYLDLILRSITEPGLLRAFVRFLLDTEKFD------GER 408
            |.:|:.           |::|.:   :.|..:|...|...|||.|:.||...|:..      |.:
 Frog   351 PELLEV-----------SELSILRSTAILTAVLHRFTATPLLRQFLTFLFGDERGPETRGDRGSQ 404

  Fly   409 ILDALVERLNSPDANLCMVTMALFDTLLGLHCEDLMLELLLK------FMLPGKHVPISHRHKIN 467
            :...|::|.|.....:.:.::.||:.:|.:..|..:..|:::      ::..|:........:..
 Frog   405 LRSQLIQRCNHLSDEISLASLRLFEEILQMPEEIALHSLVIRNLETRSYLAGGQDESRGQESETW 469

  Fly   468 KIDPYLNSSEFFLELSPDVMKRARDLARPKSVH--EPVVSE---LTPLPSLPSPVMSKTIGANWN 527
            .....|....:|.:..||...|   |.|..:.|  ||..:|   .:.|..:|..:.|...|    
 Frog   470 DGAEELEEDPYFTDGFPDTGIR---LPRSDNAHRTEPAGTEQWVKSFLSLVPEEIKSSDTG---- 527

  Fly   528 YYGVHTGDSLYANIQAYLFEAHWRIAQCQKDCLKWANSYRYQKWPRHGQGRVHAHALELARQFFS 592
            |.|             ||.:|..:...|.:...:|                              
 Frog   528 YDG-------------YLQDAIVQYRACCQQVAQW------------------------------ 549

  Fly   593 EFGGGPIAANETGEKQLDSLQSIGESSGYESFKWRPADEESEATDTTVATTASEADMDHNSSSLS 657
               |.|:::..||..|.:.         ||                                   
 Frog   550 ---GWPVSSKGTGHSQQEF---------YE----------------------------------- 567

  Fly   658 SVLGASGKRESWRTSNSNRNELILTDLDFSEDLFAQGTVSLGPFLNAIWGKLQTFTSNSLYVNLH 722
                                                     |.|:..:.|:|.........|||.
 Frog   568 -----------------------------------------GHFMEVLLGRLGGILDQPYDVNLQ 591

  Fly   723 LTGLITRLAWYPLPLIHSLLLRSDIAITSDTPSFHQVLRILKQQIDAELPVTEDSLEIIDVARSS 787
            :|.|::|||.:|.|.:...||...|.:.....|...||    .::.|:|  .:.||.:.|:....
 Frog   592 VTSLLSRLALFPHPNLQEYLLNPFITLAPGARSLFSVL----VRVVADL--AQRSLRVPDLQEML 650

  Fly   788 LIDREFRLANARKGNE 803
            |:.|...|||:  .||
 Frog   651 LLVRRQLLANS--ANE 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3558NP_001137777.1 RAI16-like 101..452 CDD:287259 85/394 (22%)
LbR-like 898..979 CDD:248061
fhip2bNP_001072514.1 RAI16-like 91..448 CDD:370927 85/388 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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