DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3558 and Fhip2a

DIOPT Version :9

Sequence 1:NP_001137777.1 Gene:CG3558 / 48421 FlyBaseID:FBgn0025681 Length:1049 Species:Drosophila melanogaster
Sequence 2:XP_342069.4 Gene:Fhip2a / 361774 RGDID:1306116 Length:764 Species:Rattus norvegicus


Alignment Length:860 Identity:164/860 - (19%)
Similarity:296/860 - (34%) Gaps:290/860 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QRPIDAATDCDPRACYDSFCKHWQQAFEIIQHSAPPSHDDVLGVV-----SHLDYMVTLLLVELH 81
            |..::|.....|  ..:.|..||    :.|.|....:.||...|.     |||:.|:.:|:.|.:
  Rat    10 QHAVEALAPSLP--LQEDFVYHW----KAITHYYIETSDDKAPVTDTNIPSHLEQMLDILVQEEN 68

  Fly    82 HCNKVSLPAAEASGPPAAPCLEFLLSENLLDKLYEWA---CTTGRYANAVRLEQLKLYELLVSHS 143
                      |.......||:|:||...:|:.||...   |..|     ::.:.|..|..|:...
  Rat    69 ----------ERESGETGPCMEYLLHHKILETLYTLGKADCPPG-----MKQQVLVFYTKLLGRI 118

  Fly   144 RHQLLCHEPFLRPLLKILASSQGEIFPPDLEKRLVILLNQLCVVLMQNVHLLDLFFFSAQTQV-- 206
            |..||.|....||:.|::... ||:.....|...:..|..:|..|.|:.:|::.|..:....:  
  Rat   119 RQPLLPHINVHRPVQKLIRLC-GEVLATPTENEEIQFLCIVCAKLKQDPYLVNFFLENKSKSLMS 182

  Fly   207 --------------------------QEQILNG--NVA-------PPKSGTTTNF---------- 226
                                      |.|.|:|  .||       ||......|.          
  Rat   183 RGALSVISEDDPKGQDPVSGDVSQCHQPQELSGATGVAHAESEEEPPHQMDDLNASLDDLSVTSL 247

  Fly   227 -------------IIFSLLIPYVHREGSLGHQARDALLLCMALSQKNSNIGTYIAQYSSICPLLV 278
                         ::.|||......:|.:..:|.:.|:|.::|.:..:  ...:||.:.:|.||.
  Rat   248 PEASAIRPNQDYNLVNSLLNLTRSPDGRIAVKACEGLMLLVSLPEPAA--AKCLAQSTCLCELLT 310

  Fly   279 TGLGGLYSRLPNSIE------ISSIDW------HRITPDDVTEIP---ELTLFMNALEFCNAVVQ 328
            ..|..||..||.|::      :.:::|      |:   :|.:..|   .|..|::..::|:.:::
  Rat   311 GRLTSLYKALPQSVDPLDIETVEAVNWGLDSYSHK---EDTSAFPGKRALISFLSWFDYCDQLIK 372

  Fly   329 VAHEMIKQQLLDFMYQGFIVPVLGPAILQTLKGKHFQTNIDSQISAMSYLDLILRSITEPGLLRA 393
            .|.:.....|...:::.|.|.|:.|.::||     .:..|   :::.:.|..|:|.:|...||:.
  Rat   373 EAQKTAAVALAKAIHERFFVGVMEPQLMQT-----SEMGI---LTSTALLHRIVRQVTSDVLLQE 429

  Fly   394 FVRFLLDTEKFDGERILD--------ALVERLNSPDANLCMVTMALFDTLLGLHCEDLMLELLLK 450
            .|.|:|. |:.:.|.:.:        .|:|..:.....:.::|:.:|:.||....|.::..|:|:
  Rat   430 MVVFILG-EQREPETLSEISRHPLRHRLIEHCDHISDEISIMTLRMFEHLLQKPNEHILYNLVLR 493

  Fly   451 FMLPGKHV---PISHRHK--------INKIDPYLNSSEFFLELSPD-VMKRARDLARPKS----- 498
            .:....:.   |:....|        ...:|  |.....|.::||| .:.....:..|::     
  Rat   494 NLEERNYTEYKPLCPEDKDVVENGLIAGAVD--LEEDPLFTDISPDNTLPNQEWICSPRASPDHP 556

  Fly   499 -------VHEPVVSELTPLPSLPSPVMSKTIGANWNYYGVHTGDSLYANIQAYLFEAHWRIAQCQ 556
                   ||:.|.|.|..:|.          .|..:|:...||      ...||.:||.:.....
  Rat   557 KNDGKTEVHKVVNSFLCLVPD----------EAKSSYHVEGTG------YDTYLRDAHRQFRDYC 605

  Fly   557 KDCLKWANSYRYQKWPRHGQGRVHAHALELARQFFSEFGGGPIAANETGEKQLDSLQSIGESSGY 621
            ..||:|       :||                       |.|                       
  Rat   606 AVCLRW-------EWP-----------------------GAP----------------------- 617

  Fly   622 ESFKWRPADEESEATDTTVATTASEADMDHNSSSLSSVLGASGKRESWRTSNSNRNELILTDLD- 685
                 :|.::                                                  .||: 
  Rat   618 -----KPLEK--------------------------------------------------CDLEA 627

  Fly   686 -FSEDLFAQGTVSLGPFLNAIWGKLQTFTSNSLYVNLHLTGLITRLAWYPLPLIHSLLLRSDIAI 749
             |.|          |.||..::.::.........|||.:|.:::||:.:|.|..|..||...:.:
  Rat   628 AFFE----------GHFLKVLFDRMGRILDQPYDVNLQVTSVLSRLSLFPHPHTHEYLLDPYVNL 682

  Fly   750 TSDTPS-FHQVLRIL 763
            .|...| |..::|::
  Rat   683 ASGCRSLFSVIVRVV 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3558NP_001137777.1 RAI16-like 101..452 CDD:287259 92/436 (21%)
LbR-like 898..979 CDD:248061
Fhip2aXP_342069.4 RAI16-like 78..495 CDD:287259 92/436 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346079
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3695
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.700

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