DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3558 and Fhip2a

DIOPT Version :9

Sequence 1:NP_001137777.1 Gene:CG3558 / 48421 FlyBaseID:FBgn0025681 Length:1049 Species:Drosophila melanogaster
Sequence 2:NP_663480.3 Gene:Fhip2a / 226252 MGIID:2147545 Length:764 Species:Mus musculus


Alignment Length:863 Identity:161/863 - (18%)
Similarity:294/863 - (34%) Gaps:296/863 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QRPIDAATDCDPRACYDSFCKHWQQAFEIIQHSAPPSHDDVLGVV-----SHLDYMVTLLLVELH 81
            |..::|.....|  ..:.|..||    :.|.|....:.||...|.     |||:.|:.:|:.|.:
Mouse    10 QHAVEALAPSLP--LQEDFVYHW----KAITHYYIETSDDKAPVTDTNIPSHLEQMLDILVQEEN 68

  Fly    82 HCNKVSLPAAEASGPPAAPCLEFLLSENLLDKLYEWA---CTTGRYANAVRLEQLKLYELLVSHS 143
                      |.......||:|:||...:|:.||...   |..|     ::.:.|..|..|:...
Mouse    69 ----------ERESGETGPCMEYLLHHKILETLYTLGKADCPPG-----MKQQVLVFYTKLLGRI 118

  Fly   144 RHQLLCHEPFLRPLLKILASSQGEIFPPDLEKRLVILLNQLCVVLMQNVHLLDLFFFS------- 201
            |..||.|....||:.|::... ||:.....|...:..|..:|..|.|:.:|::.|..:       
Mouse   119 RQPLLPHINVHRPVQKLIRLC-GEVLATPTENEEIQFLCIVCAKLKQDPYLVNFFLENKSKSLVS 182

  Fly   202 ----------------------AQTQVQEQI----------------------------LNGNVA 216
                                  :|.|..:::                            ||....
Mouse   183 RGALSVISEDGPKGQDPGSGDVSQCQQPQELSGATGVEPTESEEEPPHQMDDLSASLDDLNVTSL 247

  Fly   217 PPKSGTTTN---FIIFSLLIPYVHREGSLGHQARDALLLCMALSQKNSNIGTYIAQYSSICPLLV 278
            |..|....|   .::.|||......:|.:..:|.:.|:|.::|.:..:  ...:||.:.:|.||.
Mouse   248 PEASAVRPNQDYNLVNSLLNLTRSPDGRIAVKACEGLMLLVSLPEPAA--AKCLAQSTCLCELLT 310

  Fly   279 TGLGGLYSRLPNSIE------ISSIDW------HRITPDDVTEIP---ELTLFMNALEFCNAVVQ 328
            ..|..||..||.|::      :.:::|      |:   :|.:..|   .|..|::..::|:.:::
Mouse   311 GRLTSLYKALPQSVDPLDIETVEAVNWGLDSYSHK---EDASAFPGKRALISFLSWFDYCDQLIK 372

  Fly   329 VAHEMIKQQLLDFMYQGFIVPVLGPAILQTLKGKHFQTNIDSQ---ISAMSYLDLILRSITEPGL 390
            .|.:.....|...:::.|.|.|:.|.::||           |:   :::.:.|..|:|.:|...|
Mouse   373 EAQKTAAVALAKAIHERFFVGVMEPQLMQT-----------SEMGILTSTALLHRIVRQVTSDVL 426

  Fly   391 LRAFVRFLLDTEKFDGERILD--------ALVERLNSPDANLCMVTMALFDTLLGLHCEDLMLEL 447
            |:..|.|:|. |:.:.|.:.:        .|:|..:.....:.::|:.:|:.||....|.::..|
Mouse   427 LQEMVVFILG-EQREPETLSEISRHPLRHRLIEHCDHISDEISIMTLRMFEHLLQKPNEHILYNL 490

  Fly   448 LLKFM-----------LPGKHVPISHRHKINKIDPYLNSSEFFLELSPD-VMKRARDLARPKS-- 498
            :|:.:           .|.....:.:......:|  |.....|.::||| .:.....:..|::  
Mouse   491 VLRNLEERNYTENKPSCPEDKDVVENGLIAGAVD--LEEDPLFTDISPDNTLPNQEWICSPRTSP 553

  Fly   499 ----------VHEPVVSELTPLPSLPSPVMSKTIGANWNYYGVHTGDSLYANIQAYLFEAHWRIA 553
                      ||:.|.|.|..:|.          .|..:|:...||      ...||.:||.:..
Mouse   554 DHPKNDGKTEVHKVVNSFLCLVPD----------DAKSSYHVEGTG------YDTYLRDAHRQFR 602

  Fly   554 QCQKDCLKWANSYRYQKWPRHGQGRVHAHALELARQFFSEFGGGPIAANETGEKQLDSLQSIGES 618
            .....|.:|       :||                       |.|                    
Mouse   603 DYCAICSRW-------EWP-----------------------GAP-------------------- 617

  Fly   619 SGYESFKWRPADEESEATDTTVATTASEADMDHNSSSLSSVLGASGKRESWRTSNSNRNELILTD 683
                    :|.::                                                  .|
Mouse   618 --------KPLEK--------------------------------------------------CD 624

  Fly   684 LD--FSEDLFAQGTVSLGPFLNAIWGKLQTFTSNSLYVNLHLTGLITRLAWYPLPLIHSLLLRSD 746
            |:  |.|          |.||..::.::.........|||.:|.:::||:.:|.|..|..||...
Mouse   625 LEAAFFE----------GHFLKVLFDRMGRILDQPYDVNLQVTSVLSRLSLFPHPHTHEYLLDPY 679

  Fly   747 IAITSDTPS-FHQVLRIL 763
            |.:.|...| |..::|::
Mouse   680 INLASGCRSLFSVIVRVV 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3558NP_001137777.1 RAI16-like 101..452 CDD:287259 90/439 (21%)
LbR-like 898..979 CDD:248061
Fhip2aNP_663480.3 RAI16-like 78..495 CDD:287259 90/439 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..236 2/45 (4%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842618
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3695
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.700

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