DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3558 and fhip2a

DIOPT Version :9

Sequence 1:NP_001137777.1 Gene:CG3558 / 48421 FlyBaseID:FBgn0025681 Length:1049 Species:Drosophila melanogaster
Sequence 2:NP_001315118.1 Gene:fhip2a / 100038786 ZFINID:ZDB-GENE-070424-63 Length:747 Species:Danio rerio


Alignment Length:641 Identity:142/641 - (22%)
Similarity:241/641 - (37%) Gaps:158/641 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QRPIDAATDCDPRACYDSFCKHWQQAFEIIQHSAPPSHDDVLGVV-----SHLDYMVTLLLVELH 81
            |..::|.....|  ..:.|..||    :.|.|....:.||...|.     |||:.|:.:|..|  
Zfish    10 QHAVEALAPSLP--LQEDFVYHW----KAITHYYIETSDDKAPVTDTNIPSHLEQMLDILTQE-- 66

  Fly    82 HCNKVSLPAAEASGPPAAPCLEFLLSENLLDKLYEWA---CTTGRYANAVRLEQLKLYELLVSHS 143
                    ..|.......||:|:||...:|:.||...   |..|     ::.:.|..|..|:...
Zfish    67 --------ERERESGETGPCMEYLLHHKILETLYTLGKADCPPG-----MKQQVLSFYTKLLGRI 118

  Fly   144 RHQLLCHEPFLRPLLKILASSQGEIFPPDLEKRLVILLNQLCVVLMQNVHLLDLFF--------- 199
            |..||.|....||:.|::... ||:.....|...:..|..:|..|.|:.:|::.|.         
Zfish   119 RQPLLPHINVHRPVQKLVRLC-GEVLAAPTENEEIQFLCTVCAKLKQDPYLVNFFLENKNKRLEA 182

  Fly   200 ----------------FSAQTQVQEQILNGNV--------APPKSGTTT-----NF-IIFSLLIP 234
                            .:.|.|.|...|..:.        |.|.|...|     |: ::.|||..
Zfish   183 GKEAGTDQVKDDPSSPDTGQNQNQNSSLEDSASQAPSPAEAKPSSVHNTLPNNDNYNLVSSLLNL 247

  Fly   235 YVHREGSLGHQARDALLLCMALSQKNSNIGTYIAQYSSICPLLVTGLGGLYSRLPNSIE------ 293
            ....:|.:..:|.:.|:|.::|.:..:  ...:.:.:.:..||...||..|..||.|::      
Zfish   248 TKSPDGRIVVKACEGLMLIVSLPEPAA--AKCLTENTELSQLLTDRLGQFYRALPQSMDPLDIET 310

  Fly   294 ISSIDWHRITPDDVTEIPE----------LTLFMNALEFCNAVVQVAHEMIKQQLLDFMYQGFIV 348
            :.|::|..    ||..:.|          |..|::.|::|:.:::.||:.....|...:.:.|.|
Zfish   311 VESVNWGL----DVYNLKEDAAAFAGKRALISFLSWLDYCDQLIKEAHKSAAAVLARAVRERFFV 371

  Fly   349 PVLGPAILQTLKGKHFQTNIDSQISAMSYLDLILRSITEPGLLRAFVRFLLDTEKFDGERIL--- 410
            .|:.|.::||     .:..|   :::.:.|:.|:|.:|...||:..:.|||..|  .|...|   
Zfish   372 AVMEPQLMQT-----SEVGI---LTSTALLNRIIRQVTSEALLQETIYFLLGEE--TGPETLAGI 426

  Fly   411 ------DALVERLNSPDANLCMVTMALFDTLLGLHCEDLMLELLLKFM--------------LPG 455
                  ..|:|..:.....:.::|:.||:.||...|:.::..|:|:.:              ...
Zfish   427 TQHPLRHRLIEHCDHLSDEISIMTLRLFEHLLQKPCQHILQNLVLRCLEERNYSENKQQEEREER 491

  Fly   456 KHVPISHRHKINKIDPYLNSSEFFLELSPDVMKRARD---LARPKS-----------VHEPVVSE 506
            :|:.....|  :.:|  |.....|.:||||....:.|   .:.|.|           ||:.|.|.
Zfish   492 EHMENGQPH--DAVD--LEEDPLFSDLSPDNRLSSPDWLSCSPPASTEHTKPDGKTEVHKIVNSF 552

  Fly   507 LTPLPSLPSPVMSKTIGANWNYYGVHTGDSLYANIQAYLFEAHWRIAQCQKDCLKW 562
            |..:|.          .|..:|....||      ...||.:||.:.......|.||
Zfish   553 LCLVPD----------EAKSSYQVEGTG------YDTYLRDAHRQFRDYCGICQKW 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3558NP_001137777.1 RAI16-like 101..452 CDD:287259 94/417 (23%)
LbR-like 898..979 CDD:248061
fhip2aNP_001315118.1 RAI16-like 78..474 CDD:287259 94/417 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587034
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3695
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.700

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