DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NONO and pabp

DIOPT Version :9

Sequence 1:NP_001138880.1 Gene:NONO / 4841 HGNCID:7871 Length:471 Species:Homo sapiens
Sequence 2:NP_593377.1 Gene:pabp / 2541505 PomBaseID:SPAC57A7.04c Length:653 Species:Schizosaccharomyces pombe


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NONONP_001138880.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
DBHS 54..373
RRM1_p54nrb 73..143 CDD:410001
RRM_SF 149..228 CDD:418427
NOPS_p54nrb_PSF_PSPC1 219..311 CDD:240581
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 443..471
pabpNP_593377.1 PABP-1234 80..642 CDD:130689
RRM1_I_PABPs 81..160 CDD:240824
RRM2_I_PABPs 166..242 CDD:240825
RRM3_I_PABPs 260..339 CDD:240826
RRM4_I_PABPs 363..441 CDD:240827
PolyA 581..644 CDD:197769
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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