DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NONO and cxr1

DIOPT Version :10

Sequence 1:NP_031389.3 Gene:NONO / 4841 HGNCID:7871 Length:471 Species:Homo sapiens
Sequence 2:NP_596601.2 Gene:cxr1 / 2540551 PomBaseID:SPBC23E6.01C Length:473 Species:Schizosaccharomyces pombe


Alignment Length:146 Identity:42/146 - (28%)
Similarity:66/146 - (45%) Gaps:19/146 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    71 TQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLR 135
            |..|.:|||.|...::|||::.||:.:|:...|.|...||.||::...|..||||..:|...||.
pombe   300 TANSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLG 364

Human   136 GKQLRVRFACHSASLT--VRNLPQYVSNELL-------------EEAFSVFGQVERAVVIVDDRG 185
            ..::|:.:..:...:.  ..|....||...:             :..||.:..|..:.:.:..||
pombe   365 NSRIRLSWGRNQNPIAAPALNYQSQVSQTTIPATSLFPAMSLPPQAQFSPYPAVAPSPLALQTRG 429

Human   186 RPSGKGIVEFS-GKPA 200
            .|.|   :|.| |.||
pombe   430 APIG---MEISIGSPA 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NONONP_031389.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
DBHS 54..373 42/146 (29%)
RRM1_p54nrb 73..143 CDD:410001 26/69 (38%)
RRM_SF 149..228 CDD:473069 15/68 (22%)
NOPS_p54nrb_PSF_PSPC1 219..311 CDD:240581
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 443..471
cxr1NP_596601.2 RRM1_NGR1_NAM8_like 94..173 CDD:410023
RRM2_NGR1_NAM8_like 185..264 CDD:410025
RRM3_NGR1_NAM8_like 302..373 CDD:409782 26/70 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.