DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp65Ab1 and Lcp65Ag2

DIOPT Version :9

Sequence 1:NP_524814.2 Gene:Lcp65Ab1 / 48382 FlyBaseID:FBgn0020644 Length:104 Species:Drosophila melanogaster
Sequence 2:NP_477272.1 Gene:Lcp65Ag2 / 38702 FlyBaseID:FBgn0020637 Length:105 Species:Drosophila melanogaster


Alignment Length:106 Identity:59/106 - (55%)
Similarity:76/106 - (71%) Gaps:3/106 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFLIVFVALFAMAVARPNLAE--IVRQVSDVEPEKWSSDVETSDGTSIKQEGVLKNAGTDNEAA 63
            ||||||||||||:|:|.|...|  |||..|||.||.:..|.|||||.:.:..|.|.:.||:|||.
  Fly     1 MKFLIVFVALFAVALAAPAAEEPTIVRSESDVGPESFKYDWETSDGQAAQAVGQLNDIGTENEAI 65

  Fly    64 VVHGSFTWVDEKTGEKFTITYVADENGYQPQGAHLPVAPVA 104
            .|.||:.::.: .|:.:.:.|:||:||:|||||||||||||
  Fly    66 SVSGSYRFIAD-DGQTYQVNYIADKNGFQPQGAHLPVAPVA 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65Ab1NP_524814.2 Chitin_bind_4 40..91 CDD:306811 20/50 (40%)
Lcp65Ag2NP_477272.1 Chitin_bind_4 37..92 CDD:306811 21/55 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466884
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2EQ63
Homologene 1 1.000 - - H43214
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.930

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