DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp65Ab1 and Cpr49Ag

DIOPT Version :10

Sequence 1:NP_524814.2 Gene:Lcp65Ab1 / 48382 FlyBaseID:FBgn0020644 Length:104 Species:Drosophila melanogaster
Sequence 2:NP_610776.1 Gene:Cpr49Ag / 36353 FlyBaseID:FBgn0033730 Length:134 Species:Drosophila melanogaster


Alignment Length:130 Identity:42/130 - (32%)
Similarity:62/130 - (47%) Gaps:32/130 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FLIVFVALFAMAVARP--------------NLAEIVRQ--VSDVEPEKWSSDVETSDGTSIKQEG 51
            ||:....|.:..:|||              ..|.||:|  |::.: ..::|..|||:|..::..|
  Fly     6 FLVCSALLLSYVLARPQDQRAGATSAATTTTAATIVKQDNVNNAD-GSFNSSYETSNGIRVENIG 69

  Fly    52 VL------KNAGTDNEAAVVH--------GSFTWVDEKTGEKFTITYVADENGYQPQGAHLPVAP 102
            .|      |...:|.:....|        ||:::.| ..|...|:.|||||||:||:|.||||||
  Fly    70 YLKKIIVPKTETSDGQVIDEHEELVLVQTGSYSYSD-PDGNLITLRYVADENGFQPEGDHLPVAP 133

  Fly   103  102
              Fly   134  133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65Ab1NP_524814.2 Chitin_bind_4 40..91 CDD:459790 20/64 (31%)
Cpr49AgNP_610776.1 Chitin_bind_4 53..122 CDD:459790 21/69 (30%)

Return to query results.
Submit another query.