DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp65Ab1 and Lcp4

DIOPT Version :10

Sequence 1:NP_524814.2 Gene:Lcp65Ab1 / 48382 FlyBaseID:FBgn0020644 Length:104 Species:Drosophila melanogaster
Sequence 2:NP_476622.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster


Alignment Length:105 Identity:37/105 - (35%)
Similarity:50/105 - (47%) Gaps:19/105 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KFLIVFVALFAMAVARPNLAEIVRQVSDVEPEKWSSDVETSDGTSIKQEGVLKNAGTDNEAAVVH 66
            |.|:| .||.|:..|..| .|:...|:||:.:.:.|.:            ||.|....:....||
  Fly     3 KILLV-CALVALVAANEN-PEVKELVNDVQADGFVSKL------------VLDNGSAASATGDVH 53

  Fly    67 GS----FTWVDEKTGEKFTITYVADENGYQPQGAHLPVAP 102
            |:    |.||..: ||...::|.|||||||||...||..|
  Fly    54 GNIDGVFEWVSPE-GEHVRVSYKADENGYQPQSDLLPTPP 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65Ab1NP_524814.2 Chitin_bind_4 40..91 CDD:459790 16/54 (30%)
Lcp4NP_476622.1 Chitin_bind_4 40..81 CDD:459790 15/41 (37%)

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