DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp65Ab2 and LOC5666861

DIOPT Version :10

Sequence 1:NP_788469.1 Gene:Lcp65Ab2 / 48381 FlyBaseID:FBgn0020643 Length:104 Species:Drosophila melanogaster
Sequence 2:XP_001688772.2 Gene:LOC5666861 / 5666861 VectorBaseID:AGAMI1_006861 Length:131 Species:Anopheles gambiae


Alignment Length:106 Identity:37/106 - (34%)
Similarity:53/106 - (50%) Gaps:15/106 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FLIVFVALF-------AMAVARPNLAEIVRQVSDVEPEKWSSDVETSDGTSIKQEGVLKNAGTDN 60
            ||::.|.|.       |..| .|||.....:..|   |:.....:|:||.| ::|.|  :...|.
Mosquito     7 FLLLLVPLLCGVGGAPAQGV-DPNLKSFYHEADD---EEQMFSYKTNDGQS-REETV--SWDKDT 64

  Fly    61 EAAVVHGSFTWVDEKTGEKFTITYVADENGYQPQGAHLPVA 101
            ...|:.|.:.::. ..|..:|:.|||||||:||.|||||.|
Mosquito    65 GKIVISGWYRYLG-PDGVLYTVQYVADENGFQPLGAHLPGA 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65Ab2NP_788469.1 Chitin_bind_4 40..91 CDD:459790 17/50 (34%)
LOC5666861XP_001688772.2 None

Return to query results.
Submit another query.