DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp65Ab2 and Cpr78Ca

DIOPT Version :9

Sequence 1:NP_788469.1 Gene:Lcp65Ab2 / 48381 FlyBaseID:FBgn0020643 Length:104 Species:Drosophila melanogaster
Sequence 2:NP_649298.2 Gene:Cpr78Ca / 40352 FlyBaseID:FBgn0037067 Length:127 Species:Drosophila melanogaster


Alignment Length:114 Identity:33/114 - (28%)
Similarity:54/114 - (47%) Gaps:22/114 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKF--LIVFVALFAMAV------ARPNLAEIVRQVSDVEPE---KWSSDVETSDGTSIKQEGVLK 54
            |.|  ::||:.|..:.:      ..|:|...: ...:..|:   .:|.:.:|::|.:      .|
  Fly     2 MSFGKIVVFLVLVLVQLIHCTRFTAPSLDRTI-YYRNTPPDPFGHYSFEFQTTNGIT------TK 59

  Fly    55 NAGTDNEAAVVHGSFTWVDEKTGEKFTITYVADENGYQPQGAHLPVAPV 103
            .||.:|.|.   |...:|..: |...|.:||||.|||||.|.|:|..|:
  Fly    60 GAGNENGAV---GVVQFVSPE-GIPVTFSYVADANGYQPTGDHIPAIPL 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65Ab2NP_788469.1 Chitin_bind_4 40..91 CDD:306811 16/50 (32%)
Cpr78CaNP_649298.2 Chitin_bind_4 46..92 CDD:278791 17/55 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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