DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp65Ab2 and Cpr62Bb

DIOPT Version :10

Sequence 1:NP_788469.1 Gene:Lcp65Ab2 / 48381 FlyBaseID:FBgn0020643 Length:104 Species:Drosophila melanogaster
Sequence 2:XP_308913.3 Gene:Cpr62Bb / 1270233 VectorBaseID:AGAMI1_003915 Length:169 Species:Anopheles gambiae


Alignment Length:126 Identity:30/126 - (23%)
Similarity:52/126 - (41%) Gaps:36/126 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LIVFVALF-AMAVARPNLAEIVRQVSDVEPEKWSSDVETSDGTSIKQEGVLKNAGTDNEAAVVHG 67
            |::.:|:| :.|:|||..|     |...:..|::.:...:|.::    |.:|:.....:..||.|
Mosquito     9 LLLALAMFGSSALARPGYA-----VDYYDHPKYAFNYGVADHST----GDVKSQHETRDGDVVKG 64

  Fly    68 SFTWVDEKTGEKFTITYVADE-NGYQPQGA------------------------HLPVAPV 103
            .::.| |..|...|:.|.||. ||:....:                        |:|.|||
Mosquito    65 QYSLV-EPDGSVRTVDYTADPINGFNAVVSKTAPLVHAHAPVVKHVVPAVKAVHHVPAAPV 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp65Ab2NP_788469.1 Chitin_bind_4 40..91 CDD:459790 14/51 (27%)
Cpr62BbXP_308913.3 Chitin_bind_4 36..88 CDD:459790 14/56 (25%)
DamX <92..145 CDD:442497 5/33 (15%)

Return to query results.
Submit another query.