DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstD8 and Clic

DIOPT Version :9

Sequence 1:NP_524916.1 Gene:GstD8 / 48341 FlyBaseID:FBgn0010044 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001259537.2 Gene:Clic / 32349 FlyBaseID:FBgn0030529 Length:260 Species:Drosophila melanogaster


Alignment Length:173 Identity:40/173 - (23%)
Similarity:72/173 - (41%) Gaps:29/173 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CRSVIMTAKALGVDLNMKLLKVMDGEQLKP------EFVKLNPQHCIPTLVDDGFSIWESRAILI 70
            |:...|....| .:|....|||...:..||      .|...:|    |.|:|:|.:|.|:..|..
  Fly    43 CQEYFMDLYLL-AELKTISLKVTTVDMQKPPPDFRTNFEATHP----PILIDNGLAILENEKIER 102

  Fly    71 YLVEKYGADDSLYPSDPQKKAVVNQRLYFDMGTLFQSFVEAIYPQIRNNHPADPEAMQKVDSAFG 135
            ::::......:|:..| ::.|.:.:.||..:..:.....||     :||  |....::|::.   
  Fly   103 HIMKNIPGGYNLFVQD-KEVATLIENLYVKLKLMLVKKDEA-----KNN--ALLSHLRKIND--- 156

  Fly   136 HLDTFLEDQEYVAGDCLTIADIALLASVSTFEV-----VDFDI 173
            ||..  .:..::.||.:...|..|:..:....|     |||:|
  Fly   157 HLSA--RNTRFLTGDTMCCFDCELMPRLQHIRVAGKYFVDFEI 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD8NP_524916.1 GstA 1..188 CDD:223698 40/173 (23%)
GST_N_Delta_Epsilon 1..74 CDD:239343 18/67 (27%)
GST_C_Delta_Epsilon 88..204 CDD:198287 20/91 (22%)
ClicNP_001259537.2 GST_N_CLIC 18..112 CDD:239359 18/73 (25%)
O-ClC 21..231 CDD:129941 40/173 (23%)
GST_C_CLIC 118..232 CDD:198307 21/93 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460356
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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