back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment GstD8 and Gsta2

DIOPT Version :9

Sequence 1:	NP_524916.1	Gene:	GstD8 / 48341	FlyBaseID:	FBgn0010044	Length:	212	Species:	Drosophila melanogaster
Sequence 2:	NP_058709.2	Gene:	Gsta2 / 24422	RGDID:	2754	Length:	222	Species:	Rattus norvegicus

Alignment Length:	213	Identity:	52/213 - (24%)
Similarity:	91/213 - (42%)	Gaps:	68/213 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly    21 ALGVDLNMKLLK-VMDGEQLKPEFVKLNPQHCIPTLVDDGFSIWESRAILIYLVEKYGADDSLYP 84
            |.||:.:.|.:: ..|.|:||.:...:..|  :|.:..||..:.::||||.|:..||    .||.
  Rat    25 AAGVEFDEKFIQSPEDLEKLKKDGNLMFDQ--VPMVEIDGMKLAQTRAILNYIATKY----DLYG 83

  Fly    85 SDPQKKAVVNQRLY----FDMGTLFQSFVEAIYP-------------QIRNNH-PADPEAMQKVD 131
            .|.:::|:::  :|    .|:..:....|  |.|             :.:|.: |    |.:||.
  Rat    84 KDMKERALID--MYTEGILDLTEMIMQLV--ICPPDQKEAKTALAKDRTKNRYLP----AFEKVL 140

  Fly   132 SAFGHLDTFLEDQEYVAGDCLTIADIALLASVSTFEVVDFD----------------IAQYPNVA 180
            .:.|        |:|:.|:.||..||.||..:  ..|.:||                |:..|||.
  Rat   141 KSHG--------QDYLVGNRLTRVDIHLLELL--LYVEEFDASLLTSFPLLKAFKSRISSLPNVK 195

  Fly   181 RWYE---------NAKEV 189
            ::.:         :||::
  Rat   196 KFLQPGSQRKLPVDAKQI 213

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.