DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD7 and eEF1gamma

DIOPT Version :9

Sequence 1:NP_525114.1 Gene:GstD7 / 48340 FlyBaseID:FBgn0010043 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_001189308.1 Gene:eEF1gamma / 44791 FlyBaseID:FBgn0029176 Length:431 Species:Drosophila melanogaster


Alignment Length:197 Identity:49/197 - (24%)
Similarity:80/197 - (40%) Gaps:32/197 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LYNFPMAPASRAIQMVAKALGLEL----NSKLINTMEGDQLKPEFVRINPQHTIPTL-VDNGFVI 65
            ||.:|....:....:.|:..|.::    |.|...|.:    ..||::..|...:|.. ...|..:
  Fly     6 LYTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNK----SAEFLKKFPGGKVPAFETAEGQYL 66

  Fly    66 WESRAIAVYLVEKY---GKPDSPLYPNDPQKRALINQRLYFDMGTLYDALTKYFFLIFRTGKFGD 127
            .||.|||..|..:.   ||        .|..:|.:.|.:.|....:..|...:.|.:.  |....
  Fly    67 SESNAIAYLLANEQLRGGK--------CPFVQAQVQQWISFADNEIVPASCAWVFPLL--GILPQ 121

  Fly   128 QE---ALDKVNSAFGFLNTFLEGQDFVAGSQLTVADIVILATVSTVEWFSFDL-----SKFPNVE 184
            |:   |..:..:....||..|:...|:||.::|:||||:.:  |.:..:.:.|     |.|.||.
  Fly   122 QKNSTAKQEAEAVLQQLNQKLQDATFLAGERITLADIVVFS--SLLHLYEYVLEPSVRSAFGNVN 184

  Fly   185 RW 186
            ||
  Fly   185 RW 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD7NP_525114.1 GST_N_Delta_Epsilon 4..77 CDD:239343 19/75 (25%)
GstA 6..188 CDD:223698 49/197 (25%)
GST_C_Delta_Epsilon 92..206 CDD:198287 27/103 (26%)
eEF1gammaNP_001189308.1 GST_N_EF1Bgamma 4..79 CDD:239342 19/76 (25%)
GstA 5..187 CDD:223698 49/197 (25%)
GST_C_EF1Bgamma_like 90..209 CDD:198290 27/101 (27%)
EF1G 271..376 CDD:279041
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459944
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.