DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstD7 and vars1

DIOPT Version :10

Sequence 1:NP_525114.1 Gene:GstD7 / 48340 FlyBaseID:FBgn0010043 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_001298275.1 Gene:vars1 / 114427 ZFINID:ZDB-GENE-010601-1 Length:1271 Species:Danio rerio


Alignment Length:155 Identity:36/155 - (23%)
Similarity:56/155 - (36%) Gaps:29/155 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PTLV---DNGFVIWESRAIAVYLVEKYGKPDSPLYPNDPQKRALINQRLYFDMGTLYDALTKYFF 117
            |.||   ..|.|:..:.|::.||.....:..|     |.::.:.:.|.|.|....|........|
Zfish    45 PALVLAGAGGTVLSGTSAVSWYLAATGKRAGS-----DKKQESQVWQWLSFAENELTPVACAVAF 104

  Fly   118 LIFRTGKFGDQEALDKVNSA-----FGFLNTFLEGQDFVAGSQLTVADIVILATVSTVEWFSF-- 175
            .:.  |..|..:.|.:.:.|     ...|:..|..:.|:.|..:|:||    |.|:......|  
Zfish   105 PLL--GIMGVDKKLQQSSRAELLRVLKALDGTLALRTFLVGESVTLAD----AAVAMAALLPFKY 163

  Fly   176 -----DLSKFPNVERWLK---NAPK 192
                 |.....||.||..   |.|:
Zfish   164 ALEPADRKSLVNVTRWFNTCVNQPQ 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD7NP_525114.1 GST_N_Delta_Epsilon 4..77 CDD:239343 8/23 (35%)
GST_C_Delta_Epsilon 92..206 CDD:198287 26/116 (22%)
vars1NP_001298275.1 GST_C_ValRS_N 80..202 CDD:198327 26/115 (23%)
PTZ00419 291..1270 CDD:240411
Blue background indicates that the domain is not in the aligned region.

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