DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstD6 and Gstt1

DIOPT Version :10

Sequence 1:NP_524915.1 Gene:GstD6 / 48339 FlyBaseID:FBgn0010042 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_445745.1 Gene:Gstt1 / 25260 RGDID:2765 Length:240 Species:Rattus norvegicus


Alignment Length:205 Identity:56/205 - (27%)
Similarity:93/205 - (45%) Gaps:26/205 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDLYNMSGSPSTRAVMMTAKAVGVEFNSIQVNTFVGEQLEPWFVKINPQHTIPTLVDNLFVIWET 65
            ::||....|...||:.:.||...:.|....|....||.|...|.::||...:|.:.|..|.:.|:
  Rat     3 LELYLDLLSQPCRAIYIFAKKNNIPFQMHTVELRKGEHLSDAFAQVNPMKKVPAMKDGGFTLCES 67

  Fly    66 RAIVVYLVEQYGKDDSLYPKDPQKQALINQRLYFDMGTLYDGIA-----KYFFPLLRTGKPGTQE 125
            .||::||..:|...|..||:|.|.:|.:::.|.:...||.....     |..||:. .|:....|
  Rat    68 VAILLYLAHKYKVPDHWYPQDLQARARVDEYLAWQHTTLRRSCLRTLWHKVMFPVF-LGEQIRPE 131

  Fly   126 NLEKLNAAFD-----LLNNFLDGQDYVAGNQLSVADIVILATVSTTEMVD--------FDLKKFP 177
            .|....|..|     |.:.||..:|::.|..:|:||:|.:     ||::.        |:.:  |
  Rat   132 MLAATLADLDVNVQVLEDQFLQDKDFLVGPHISLADVVAI-----TELMHPVGGGCPVFEGR--P 189

  Fly   178 NVDRWYKNAQ 187
            .:..||:..:
  Rat   190 RLAAWYRRVE 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD6NP_524915.1 GST_N_Delta_Epsilon 1..74 CDD:239343 23/72 (32%)
GST_C_Delta_Epsilon 88..204 CDD:198287 28/118 (24%)
Gstt1NP_445745.1 GST_N_Theta 3..78 CDD:239348 23/74 (31%)
GST_C_Theta 91..217 CDD:198292 27/117 (23%)

Return to query results.
Submit another query.