DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstD6 and Mars1

DIOPT Version :9

Sequence 1:NP_524915.1 Gene:GstD6 / 48339 FlyBaseID:FBgn0010042 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_001165053.1 Gene:Mars1 / 216443 MGIID:1345633 Length:910 Species:Mus musculus


Alignment Length:175 Identity:42/175 - (24%)
Similarity:73/175 - (41%) Gaps:43/175 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDLYNMSGSPSTRAVMMTA-----------KAVGVEFNSIQVNTFVGEQLEPWFVKINPQHTIPT 54
            |.|:...|||.:..|:..|           ..||.|           |.:.|:..:  |:  :|.
Mouse     1 MRLFVSEGSPGSLPVLAAAARARGRAELLISTVGPE-----------ECVVPFLTR--PK--VPV 50

  Fly    55 L-VDNLFVIWETRAIVVY--LVEQYGKDDSLYPKDPQKQALINQRLYFDMGTLYDGIAKYFFPLL 116
            | :|:...::...||..|  |:..:.:||           |.||.|.::...|...::.....|:
Mouse    51 LQLDSGNYLFSASAICRYFFLLCGWEQDD-----------LTNQWLEWEATELQPVLSAALHCLV 104

  Fly   117 RTGKPGTQENLEKLNAAFDLLNNFLDGQD--YVAGNQLSVADIVI 159
            ..||.| ::.|..|......:::.|..|:  ::||:..|:||||:
Mouse   105 VQGKKG-EDILGPLRRVLTHIDHSLSRQNCPFLAGDTESLADIVL 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD6NP_524915.1 GST_N_Delta_Epsilon 1..74 CDD:239343 20/86 (23%)
PLN02395 11..208 CDD:166036 37/165 (22%)
GST_C_Delta_Epsilon 88..204 CDD:198287 20/74 (27%)
Mars1NP_001165053.1 Thioredoxin_like 1..68 CDD:294274 18/81 (22%)
GstA <47..189 CDD:223698 29/116 (25%)
GST_C_MetRS_N 77..179 CDD:198340 22/84 (26%)
PRK12268 266..821 CDD:237029
MetRS_core 267..635 CDD:173907
'HIGH' region 275..285
'KMSKS' region 595..599
Anticodon_Ia_Met 644..773 CDD:153411
MetRS_RNA 855..899 CDD:238475
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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