DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstD6 and gst-29

DIOPT Version :9

Sequence 1:NP_524915.1 Gene:GstD6 / 48339 FlyBaseID:FBgn0010042 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_497118.1 Gene:gst-29 / 190225 WormBaseID:WBGene00001777 Length:209 Species:Caenorhabditis elegans


Alignment Length:147 Identity:35/147 - (23%)
Similarity:72/147 - (48%) Gaps:26/147 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 PQHTIPTLVDNLFVIWETRAIVVYLVEQYGKDDSLYP-KDPQKQ----ALINQRLYFDMGTLYDG 107
            |...:|.|..:.|.|.::.||:.||..::|     |. |.|::|    |:::|  :.|..:|:  
 Worm    49 PFGQVPVLYVDGFEIPQSAAIIRYLANKFG-----YAGKTPEEQAWADAIVDQ--FKDFMSLF-- 104

  Fly   108 IAKYFFPLLRTGKP-------GTQENLEKLNAAFDLLNNFLD--GQDYVAGNQLSVADIVILATV 163
              :.|....:.||.       .::..:...::.|:::.|.|:  ...::.|:.|:.||||::.::
 Worm   105 --REFKLAQKAGKSDVEIAKVASEVAIPARDSYFEIITNLLEKSKSGFLVGDGLTFADIVVVESL 167

  Fly   164 STTEMVD-FDLKKFPNV 179
            :..|.|. ||..:.|.:
 Worm   168 TNLEKVHFFDASEHPKL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstD6NP_524915.1 GST_N_Delta_Epsilon 1..74 CDD:239343 9/25 (36%)
PLN02395 11..208 CDD:166036 35/147 (24%)
GST_C_Delta_Epsilon 88..204 CDD:198287 22/106 (21%)
gst-29NP_497118.1 GST_N_Sigma_like 4..74 CDD:239337 8/24 (33%)
PTZ00057 6..209 CDD:173353 35/147 (24%)
GST_C_Sigma_like 85..191 CDD:198301 22/106 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X30
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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